DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-1 and AVA-P2

DIOPT Version :10

Sequence 1:NP_652010.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_564098.2 Gene:AVA-P2 / 838579 AraportID:AT1G19910 Length:165 Species:Arabidopsis thaliana


Alignment Length:153 Identity:52/153 - (33%)
Similarity:85/153 - (55%) Gaps:10/153 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGQLE 118
            ||...::..|.:|||.|...:|..:...||..|.:..|:::.|:....:.|||||.|:::|    
plant    17 LGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS---- 77

  Fly   119 QFSMETALSQAAIQNTNWFSGYLIFGAGLAVGLVNLFCGIAVGIVGSGAALSDAANAALFVKILI 183
                 |.::..| ::...|.||....:|||.||..|..|:|:||||.....::|....|||.:::
plant    78 -----TGINPKA-KSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMIL 136

  Fly   184 VEIFGSAIGLFGLIVGIYMTSKS 206
            :.||..|:.|:||||||.::|::
plant   137 ILIFAEALALYGLIVGIILSSRA 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_652010.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417 19/58 (33%)
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 28/63 (44%)
AVA-P2NP_564098.2 V_ATP_synt_C 13..121 CDD:130170 37/113 (33%)
ATP-synt_Vo_c_ATP6C_rpt2 89..156 CDD:349416 29/66 (44%)

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