DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-1 and Atp5mc2

DIOPT Version :10

Sequence 1:NP_652010.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_080744.1 Gene:Atp5mc2 / 67942 MGIID:1915192 Length:146 Species:Mus musculus


Alignment Length:129 Identity:30/129 - (23%)
Similarity:52/129 - (40%) Gaps:38/129 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGQLEQFSMETALSQAAIQNTNWFSGYLIFGAGL 147
            :|.|::.|...:|     ::|:...:|:::.|...:..::...:..||          ...|||.
Mouse    35 LKRPQMPTDESLS-----SLAVRRPLTSLIPSRSFQTSAISRDIDTAA----------KFIGAGA 84

  Fly   148 AVGLVNLFCGIAVGIVGSGAALSD---------AANAALFVKILIVEIFG----SAIGLFGLIV 198
            |          .||:.||||.:..         |.|.:|..::....|.|    .|:|||.|:|
Mouse    85 A----------TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMV 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_652010.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417 6/29 (21%)
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 21/74 (28%)
Atp5mc2NP_080744.1 ATP9 72..146 CDD:164765 23/87 (26%)

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