DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaPPA1-1 and ATP5MC1

DIOPT Version :10

Sequence 1:NP_652010.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_005166.1 Gene:ATP5MC1 / 516 HGNCID:841 Length:136 Species:Homo sapiens


Alignment Length:68 Identity:21/68 - (30%)
Similarity:28/68 - (41%) Gaps:23/68 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 GAGLAVGLVNLFCGIAVGIVGSGAALSD---------AANAALFVKILIVEIFG----SAIGLFG 195
            |||.|          .||:.||||.:..         |.|.:|..::....|.|    .|:|||.
Human    71 GAGAA----------TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFC 125

  Fly   196 LIV 198
            |:|
Human   126 LMV 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_652010.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 21/68 (31%)
ATP5MC1NP_005166.1 ATP9 62..136 CDD:164765 21/68 (31%)
Blue background indicates that the domain is not in the aligned region.

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