Protein Alignment VhaPPA1-1 and vha-4

DIOPT Version :10

• Sequence 1: NP_652010.1
• Gene: VhaPPA1-1 / 45247
• FlyBaseID: FBgn0028662
• Length: 212
• Species: Drosophila melanogaster
• Sequence 2: NP_495659.1
• Gene: vha-4 / 174272
• WormBaseID: WBGene00006913
• Length: 214
• Species: Caenorhabditis elegans
• Alignment Length: 212
• Identity: 122/212 - (57%)
• Similarity: 159/212 - (75%)
• Gaps: 5/212 - (2%)

  Fly     3 AQIRTVVSQTFLWLFLAVATILTLYFVMTGKGERVSVGWFLASSNPYMWACLGIGLSVSLSVVGA 67
            |.::|..:.|.:...:.:.|  .|:::::|:|.|..:||||.|::|:|||.||||.|:||||:||
 Worm     5 AILKTTATLTVITTLIILGT--GLFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGA 67

  Fly    68 ALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGQLEQFSME---TALSQA 129
            ..||.|||:||:|||||||||:||||:|:||||||||:|:|.|.|..|:|.:|..|   ......
 Worm    68 GWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGM 132

  Fly   130 AIQNTNWFSGYLIFGAGLAVGLVNLFCGIAVGIVGSGAALSDAANAALFVKILIVEIFGSAIGLF 194
            ||...|..|||:|||.||.|||.||.||:||||||||||::||||.||||||||:|||.||||||
 Worm   133 AILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLF 197

  Fly   195 GLIVGIYMTSKSKMGDK 211
            |:|:||..|:|:..|:|
 Worm   198 GMIIGIVQTNKASFGNK 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
VhaPPA1-1	NP_652010.1	ATP-synt_Vo_c_ATP6F_rpt1	51..113	CDD:349417	45/61 (74%)
		ATP-synt_Vo_c_ATP6F_rpt2	138..202	CDD:349418	50/63 (79%)
vha-4	NP_495659.1	ATP-synt_Vo_c_ATP6F_rpt1	51..113	CDD:349417	45/61 (74%)
		ATP-synt_Vo_c_ATP6F_rpt2	141..205	CDD:349418	50/63 (79%)