DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VhaPPA1-1 and LOC1271245

DIOPT Version :10

Sequence 1:NP_652010.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster
Sequence 2:XP_310004.3 Gene:LOC1271245 / 1271245 VectorBaseID:AGAMI1_005336 Length:208 Species:Anopheles gambiae


Alignment Length:208 Identity:162/208 - (77%)
Similarity:180/208 - (86%) Gaps:0/208 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IRTVVSQTFLWLFLAVATILTLYFVMTGKGERVSVGWFLASSNPYMWACLGIGLSVSLSVVGAAL 69
            :|..:...|...|::|||:|.||.|:|||||||||||||..::|||||.||||.:|:|||||||:
Mosquito     1 MRYTLGYIFSTSFVSVATVLILYHVLTGKGERVSVGWFLEETSPYMWATLGIGFAVALSVVGAAM 65

  Fly    70 GIHTTGTSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGQLEQFSMETALSQAAIQNT 134
            ||||||.|||||||||||||||||||||||||||||||||||||||.|:.|...|..:...|:|.
Mosquito    66 GIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLDSFKWSTIAANENIRNN 130

  Fly   135 NWFSGYLIFGAGLAVGLVNLFCGIAVGIVGSGAALSDAANAALFVKILIVEIFGSAIGLFGLIVG 199
            ||.|||::|||||||||||||||||||||||||||:||||:||||||||||||||||||||||||
Mosquito   131 NWMSGYVMFGAGLAVGLVNLFCGIAVGIVGSGAALADAANSALFVKILIVEIFGSAIGLFGLIVG 195

  Fly   200 IYMTSKSKMGDKE 212
            ||||||.||||||
Mosquito   196 IYMTSKVKMGDKE 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaPPA1-1NP_652010.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417 55/61 (90%)
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 59/63 (94%)
LOC1271245XP_310004.3 None

Return to query results.
Submit another query.