DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and AT1G50400

DIOPT Version :10

Sequence 1:NP_652003.2 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_175457.1 Gene:AT1G50400 / 841462 AraportID:AT1G50400 Length:310 Species:Arabidopsis thaliana


Alignment Length:335 Identity:93/335 - (27%)
Similarity:152/335 - (45%) Gaps:57/335 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PSNSGSLTESSSSAEGLDSLAAAKDAALENPGTVEELHKKC-KDIQAITFEGAKIMLNKGLSNHF 93
            |.|:..:...:...|.:|.      :.|..|...|||:::. ..::...|||.::..||.|:..|
plant     7 PINTAQVDAKTKLDEKVDY------SNLPCPVLYEELNREATMALKPELFEGFRLDYNKSLNQKF 65

  Fly    94 QVSHTINMS-----NVVPS---------GYRFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNA-- 142
            .:||:|.|.     |..||         .|.|||.::..|.:        |:|.|...|.|||  
plant    66 FLSHSILMGPTEVPNPTPSSEIIKIPTANYDFGAGFIDPKLY--------LIGRITTDGRLNARA 122

  Fly   143 --NVIHQFSARLRCKFASQIQESKVVASQLTTDYRGSDYTLSLTVANPSIFTNSGVVVGQYLQSV 205
              ::...||.:.......:..:|:   ..|..||:||||...|.:.|.|::      ...|:|.|
plant   123 KFDLTDNFSVKANALLTDEEDKSQ---GHLVIDYKGSDYRTQLQLGNNSVY------AANYIQHV 178

  Fly   206 TPALALGSELAYQFGPNVPGRQIAIMSVVG---RYTAGSSVWSGTLGQSGLHVC-YYQKASDQLQ 266
            ||.|:||.| |:..|..       :||.||   ||....:|.||.:..:|:.|. |..|.|::|.
plant   179 TPHLSLGGE-AFWLGQQ-------LMSGVGYAARYETDKTVASGQIASTGVAVMNYVHKVSEKLS 235

  Fly   267 IGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKRLAPLPFTLALSGRMNHV 331
            ...:...:...::..|::.|.:...::.|  ||.:|||..:...||::| |:.....||..::||
plant   236 FATDFIYNYLSRDVTASVGYDLITRQSRL--RGKVDSNGVVAAYLEEQL-PIGLRFLLSAEVDHV 297

  Fly   332 KNNFRLGCGL 341
            |.:::.|.|:
plant   298 KKDYKFGFGV 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_652003.2 Porin3_Tom40 57..344 CDD:132766 89/308 (29%)
AT1G50400NP_175457.1 Porin3_Tom40 28..308 CDD:132766 89/308 (29%)

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