DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and TOM40

DIOPT Version :10

Sequence 1:NP_652003.2 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_188634.1 Gene:TOM40 / 821538 AraportID:AT3G20000 Length:309 Species:Arabidopsis thaliana


Alignment Length:330 Identity:91/330 - (27%)
Similarity:147/330 - (44%) Gaps:50/330 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 AEGLDSLAAAK-DAA-----------LENPGTVEELHKKC-KDIQAITFEGAKIMLNKGLSNHFQ 94
            |:.|..|.||: ||.           |.:|...||||::. ..:::..|||.:....:.|:..|.
plant     2 ADLLPPLTAAQVDAKTKVDEKVDYSNLPSPVPYEELHREALMSLKSDNFEGLRFDFTRALNQKFS 66

  Fly    95 VSHTINMSNV------------VPSG-YRFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNANVIH 146
            :||::.|...            :|:. |.|||.|...|        .:|:|.:...|.|||.:..
plant    67 LSHSVMMGPTEVPAQSPETTIKIPTAHYEFGANYYDPK--------LLLIGRVMTDGRLNARLKA 123

  Fly   147 QFSARLRCKFASQI-QESKVVASQLTTDYRGSDYTLSLTVANPSIFTNSGVVVGQYLQSVTPALA 210
            ..:.:|..|..:.| .|..:..:....||.||||...|.:.      .|.::...|:||||..|:
plant   124 DLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQLG------QSALIGATYIQSVTNHLS 182

  Fly   211 LGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLGQSGLHVC-YYQKASDQLQIGAEVETS 274
            ||.|:.:...|...|     :....||.....|.||.:..:|..|. |.||.||::.:..:...:
plant   183 LGGEIFWAGVPRKSG-----IGYAARYETDKMVASGQVASTGAVVMNYVQKISDKVSLATDFMYN 242

  Fly   275 LRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKRLAPLPFTLALSGRMNHVKNNFRLGC 339
            ...::..|::.|...|.:|.:  ||.||||.....:||:||: :.....||..::|.|.:::.|.
plant   243 YFSRDVTASVGYDYMLRQARV--RGKIDSNGVASALLEERLS-MGLNFLLSAELDHKKKDYKFGF 304

  Fly   340 GLMIG 344
            ||.:|
plant   305 GLTVG 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_652003.2 Porin3_Tom40 57..344 CDD:132766 83/302 (27%)
TOM40NP_188634.1 Porin3_Tom40 28..309 CDD:132766 83/302 (27%)

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