DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and Tomm40l

DIOPT Version :9

Sequence 1:NP_001259313.1 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001032247.1 Gene:Tomm40l / 641376 MGIID:3589112 Length:308 Species:Mus musculus


Alignment Length:326 Identity:132/326 - (40%)
Similarity:192/326 - (58%) Gaps:24/326 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LGLQEPAPLPSNSGSLTESSSSAEGLDSLAAAKDAALENPGTVEELHKKCKDIQAITFEGAKIML 85
            |||.....||..|                 ..::..|.|||:.:|||:.|||:.....||.|:::
Mouse     5 LGLAPMGTLPRRS-----------------HRREEPLPNPGSFDELHRLCKDVFPAQMEGVKLVV 52

  Fly    86 NKGLSNHFQVSHTINMSNVVPSGYRFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNANVIHQFSA 150
            ||.||:||||:||::||.:...||.....|.|..:.||||.||.::||:|.:|:|||.|:...:.
Mouse    53 NKVLSSHFQVAHTVHMSALGLPGYHLHTAYAGDWQLSPTEVFPTVVGDMDSSGSLNAQVLLLLAE 117

  Fly   151 RLRCKFASQIQESKVVASQLTTDYRGSDYTLSLTVANPSIFTNSGVVVGQYLQSVTPALALGSEL 215
            |||.|...|.|::|.:..|...:|||.|||.:||:.||.:...|.::|..:|||:|..|.||.||
Mouse   118 RLRAKAVFQTQQAKFLTWQFDGEYRGDDYTATLTLGNPDLIGESVIMVAHFLQSITHRLVLGGEL 182

  Fly   216 AYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTL--GQSGLHVCYYQKASDQLQIGAEVETSLRMQ 278
            .|.   ..||.:.||:::.|:|:|..  |..||  |..|.|..||.||::|:|:|.|.|.:.|:|
Mouse   183 VYH---RRPGEEGAILTLAGKYSAVH--WVATLNVGSGGAHASYYHKANEQVQVGVEFEANTRLQ 242

  Fly   279 ESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKRLAPLPFTLALSGRMNHVKNNFRLGCGLMI 343
            ::..:..|.:.||:|::||||.:||||.:..||||::.|||.||||...:||.:|.|..|..:.:
Mouse   243 DTTFSFGYHLTLPQADMVFRGLVDSNWCVGAVLEKKMRPLPVTLALGAFLNHWRNRFHCGFSITV 307

  Fly   344 G 344
            |
Mouse   308 G 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_001259313.1 Porin3_Tom40 57..344 CDD:132766 125/288 (43%)
Tomm40lNP_001032247.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 9/40 (23%)
Porin3_Tom40 24..308 CDD:132766 125/288 (43%)
Required for mitochondrial targeting. /evidence=ECO:0000250 281..308 12/26 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846762
Domainoid 1 1.000 313 1.000 Domainoid score I1301
eggNOG 1 0.900 - - E1_KOG3296
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 337 1.000 Inparanoid score I2368
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55758
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm8783
orthoMCL 1 0.900 - - OOG6_101593
Panther 1 1.100 - - O PTHR10802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.760

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