DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tom40 and CG4520

DIOPT Version :10

Sequence 1:NP_652003.2 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_650483.1 Gene:CG4520 / 41902 FlyBaseID:FBgn0038355 Length:320 Species:Drosophila melanogaster


Alignment Length:284 Identity:72/284 - (25%)
Similarity:128/284 - (45%) Gaps:12/284 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 ENPGTVEELHKKCKDIQAITFEGAKIMLNKGLSNHFQVSHTINMSNVVPSGYRFGATYVGTKEFS 122
            :|||.|:.||.....:....::|.::.....|:.:..::....:|::.|||:|||..|....: .
  Fly    32 KNPGNVQNLHILAHRVMPKFYDGIELDYLHRLAPNKYITAAWVLSHIRPSGFRFGGLYTFRVQ-D 95

  Fly   123 PTEAFPVLLGDIDP---AGNLNANVIHQFSARLRCKFASQIQESKVVASQLTTDYRGSDYTLSLT 184
            .|...|.::|||.|   |.||  |:::.....||.:...|......|.||.|.::.....|.:..
  Fly    96 DTMYTPTIMGDIHPTSLAANL--NILYYPFQSLRMEAVLQKAREAAVESQYTIEWTRPCDTWTAN 158

  Fly   185 VANPSIFTNSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLG 249
            ..|  :...||......::||:...|||.||..::  |.|.:....:::..||:..:...:.|..
  Fly   159 FYN--VRNESGRCTMSVMRSVSAHWALGGELLLEW--NDPQKLTPDLALAARYSHYNYSLAATAS 219

  Fly   250 QSGLHVCYYQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKR 314
            :.||.|.|:|:....:|:...:..:...::::||:.||.:.  .|....|..||:..:..:..|.
  Fly   220 RQGLDVTYWQRIHPHIQMANLLAWNRNTRKTIATICYQWNF--WNSAVHGMFDSDASVGFMWTKY 282

  Fly   315 LAPLPFTLALSGRMNHVKNNFRLG 338
            |..||..:..|..||...:.|..|
  Fly   283 LTHLPLQMGFSVVMNLPTDRFAFG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_652003.2 Porin3_Tom40 57..344 CDD:132766 72/284 (25%)
CG4520NP_650483.1 Porin3_Tom40 33..312 CDD:132766 72/283 (25%)

Return to query results.
Submit another query.