DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and tom40

DIOPT Version :10

Sequence 1:NP_652003.2 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_595546.2 Gene:tom40 / 2540506 PomBaseID:SPBC27B12.13 Length:344 Species:Schizosaccharomyces pombe


Alignment Length:332 Identity:94/332 - (28%)
Similarity:149/332 - (44%) Gaps:42/332 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TESSSSAEGLDSLAAAKDAALENPGTVEELHKK-CKDI--QAITFEGAKIMLNKGL--SNHFQVS 96
            |..:...|.:||..::.:  |.||||.|.|.|: .|||  ....|.|.:..:.||.  |..|.||
pombe     9 TSVNQVGEKIDSYKSSLN--LINPGTCENLSKEVSKDILLSNYAFTGVRADVTKGFCTSPWFTVS 71

  Fly    97 HTINMSNVVPSGYRFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNANVIHQFSARLRCKFASQIQ 161
            |...:.:.|...|.|...:.|...|        |.|.:|..|.:.|.:...:::.:..|...|:.
pombe    72 HAFALGSQVLPPYSFSTMFGGEPLF--------LRGSVDNDGAVQAMLNCTWNSNVLSKVQMQLS 128

  Fly   162 ESKVV-ASQLTTDYRGSDYTLSLTVANPSIFTN-SGVVVGQYLQSVTPALALGSELAYQFGPNVP 224
            ...|. ..|:..|::|.|::.|....||..... :|:.:...||||||.|:||.|..:|...:..
pombe   129 NGAVPNMCQIEHDHKGKDFSFSFKAMNPWYEEKLTGIYIISLLQSVTPKLSLGVEALWQKPSSSI 193

  Fly   225 GRQIAIMSVVGRYTAGSSVWSGTL----GQSGLHVCYYQKASDQLQIGAEVETS-LRMQESVATL 284
            |.:.|.:|.:.||.|..  |..|.    .|..:...:::|.|.:::.|.|.:.| :.:..|.|.:
pombe   194 GPEEATLSYMTRYNAAD--WIATAHLNGSQGDVTATFWRKLSPKVEAGVECQLSPVGLNHSAALM 256

  Fly   285 AYQIDLPK-------------ANLVFRGGIDSNWQIFGVLEKRLAPLPFTLALSGRMNHVKNNFR 336
            ..    ||             |..::||.:||..::...||:|||| ..|||.|..::|...|.:
pombe   257 TG----PKPEGLTSVGVKYEFAQSIYRGQVDSKGRVGVYLERRLAP-AITLAFSSELDHPNRNAK 316

  Fly   337 LGCGLMI 343
            :|.||.:
pombe   317 VGLGLSL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_652003.2 Porin3_Tom40 57..344 CDD:132766 90/312 (29%)
tom40NP_595546.2 Porin3_Tom40 27..324 CDD:132766 90/312 (29%)

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