DRSC/TRiP Functional Genomics Resources

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Protein Alignment mys and Itgb8

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_796264.2 Gene:Itgb8 / 320910 MGIID:1338035 Length:767 Species:Mus musculus


Alignment Length:795 Identity:247/795 - (31%)
Similarity:367/795 - (46%) Gaps:144/795 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GQTDAQKAAKLTAVSTCASKEKCHTCIQT-EGCAWCMQPDF----KGQSRCYQNTSSL----CPE 79
            ||::..:......||       |..|:|. ..|.||:|.||    .|..|| ...|||    ||.
Mouse    40 GQSEHNRCGSANVVS-------CARCLQLGPECGWCVQEDFVSGGSGSERC-DTVSSLISKGCPV 96

  Fly    80 EFAYSPITVEQILVNNKLTNQYKAELAAGGGGSAMSGSSSSSYSSSSSSSSFYSQSSSGSSSASG 144
            :      ::|.:                            |.:..:||.:...:|.:.|..|   
Mouse    97 D------SIEYL----------------------------SVHVVTSSENEINTQVTPGEVS--- 124

  Fly   145 YEEYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSMEDDKAKLSTLGD 209
                     ||:.|         ..:.|..:.....:.||||||||:|:|.||.::..||:::|:
Mouse   125 ---------VQLHP---------GAEANFMLKVRPLKKYPVDLYYLVDVSASMHNNIEKLNSVGN 171

  Fly   210 KLSETMKRITNNFHLGFGSFVDKVLMPYVSTIPKKLEHPCE----NCKAPYGYQNHMPLNNNTES 270
            .||:.|...:.:|.|||||:|||.:.||:|..|:::.:.|.    :|..|:||.:.:.|..|...
Mouse   172 DLSKKMALYSRDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITE 236

  Fly   271 FSNEVKNATVSGNLDAPEGGFDAIMQAIACRSQIGWREQARRLLVFSTDAGFHYAGDGKLGGVIA 335
            |...|....:|||:|.|||||||::||..|.|.||||::|:|||:..||...|.|.|.||.|::.
Mouse   237 FEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVV 301

  Fly   336 PNDGECHLSPKGEYTHSTLQDYPSISQINQKVKDNAINIIFAVTASQLSVYEKLVEHIQGSSAAK 400
            ||||.|||. ...|..||..::||:.|:::|:.||.||:||||...|...|:.|:..:.|:.|.:
Mouse   302 PNDGNCHLK-NNVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGAIAGE 365

  Fly   401 LDNDSSNVVELVKEEYRKISSSVEMK-DNATGDVKITYFSSCLSNGPEVQTSKCDNLKEGQQVSF 464
            :::.::|:..||.|.|:||.|.|::: :|....|.....:.|.....:...|.|.|:....:|.|
Mouse   366 IESKAANLNNLVVEAYKKIISEVKVQLENQVHGVHFNITAICPDGARKPGISGCGNVTSNDEVLF 430

  Fly   465 TAQIQLLKCPEDPRDWTQTIHISPVGINEVMQIQLTMLCSCPCEN----PGSIGYQVQANSCSGH 525
            ...:.:..|  |.........|.|:|.||..::.:...|||.|||    .|..........|.  
Mouse   431 NVTVVMKTC--DIMGGKNYAIIKPIGFNETTKVHIHRSCSCQCENHRGLKGQCAEAAPDPKCP-- 491

  Fly   526 GTSMCGICNCDDSYFGNKCECSATDLTSKFANDTSCRADSTSTTDCSGRGHCVCGACECHKRPNP 590
                    .||||    :|...    ..:|.::| |:....... |||||.|:||.|.|||  ..
Mouse   492 --------QCDDS----RCHFD----EDQFPSET-CKPQEDQPV-CSGRGVCICGKCLCHK--TK 536

  Fly   591 IEIISGKHCECDNFSCERNRNQLCSGPDHGTCECGRCKCKPGWTGSNCGCQESNDTCMPPGGGEI 655
            :..:.|::||.|:|||......:|:|  ||.||.|||:|..||.|..|.|..::........|::
Mouse   537 LGRVYGQYCEKDDFSCPYLHGDVCAG--HGECEGGRCQCFSGWEGDRCQCPSASAQHCVNSKGQV 599

  Fly   656 CSGHGTCECGVCKCTVNDQGRFSGRHCEKCPTCSGRCQELKDCVQCQMYKTGELKNGDDCARNCT 720
            |||.|||.||.|:||   ..|..||.||.||||...|.|..:|:||...........|.|..:|.
Mouse   600 CSGRGTCVCGRCECT---DPRSIGRLCEHCPTCHLSCSENWNCLQCLHPHNLSQAALDQCKSSCA 661

  Fly   721 QFVPVGVEKVEIDETKDEQMCKFFDEDDCKFMFKYSEQGELHVYAQENKECPAKVFMLGIVMGVI 785
            .     :|:..:|:|           .:|     .|....|.::           |::.||..:|
Mouse   662 V-----MEQHRMDQT-----------SEC-----LSGPSYLRIF-----------FIIFIVTFLI 694

  Fly   786 AAI-VLVGLAILLLW 799
            ..: ||:...::|.|
Mouse   695 GLLKVLIIRQVILQW 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 151/473 (32%)
Integrin_B_tail 692..775 CDD:462325 14/82 (17%)
Integrin_b_cyt 803..843 CDD:462580
Itgb8NP_796264.2 INB 54..469 CDD:197563 152/480 (32%)
Blue background indicates that the domain is not in the aligned region.

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