DRSC/TRiP Functional Genomics Resources

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Protein Alignment mys and C05D9.3

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_001360655.1 Gene:C05D9.3 / 182254 WormBaseID:WBGene00015472 Length:453 Species:Caenorhabditis elegans


Alignment Length:426 Identity:125/426 - (29%)
Similarity:194/426 - (45%) Gaps:79/426 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 CHLSPKGEYTHSTLQDY----PSISQINQKVKDNAINIIFAVTASQLSVYEKLVEHIQGSSAAKL 401
            |.|  |.::|:.|...:    |..:|:  |::.|     ..:...|......:.:..|..|...:
 Worm    57 CQL--KSKFTNETCTPHLVYSPQTAQV--KIQQN-----LPLETKQHDGKTIVRQQPQAVSVRLM 112

  Fly   402 DNDSSNV--VELVKEEYRKISSSVEMKDNATGDVKIT-----YFSSCLSNGPEVQTSKCDNLKEG 459
            .:.|:.|  ..|.:.:..:.|:..|..:..|.|||.|     :|..|  :|...:|..| .::..
 Worm   113 PSHSATVSFKYLHQTDPSRRSTEPETMEIQTSDVKDTPLQLKFFIVC--DGELKETKSC-RVQNN 174

  Fly   460 QQVSFTAQIQLLKCPEDPRDWTQTIHISPVGI---NEVMQIQLTMLCSCPCE-NPGSIGYQVQAN 520
            |.|.|..::.:..|..     |..|.:| |||   ..:..:.:|.:|.|.|| :|     ::.:.
 Worm   175 QIVEFKIEVLVNSCSS-----TGDITLS-VGILRQRTIAGLYVTTICGCECEKHP-----EINSR 228

  Fly   521 SCSGHGTSMCGICNCDDSYFGNKCEC--------SATDLTSKFANDTSCRADSTSTTDCSGRGHC 577
            .|..:|..:||.|.||.|..|:||||        .|::|..|      ||.:|:|.. ||..|.|
 Worm   229 LCHQNGHLVCGQCVCDQSRGGDKCECPLASHGVSKASELEDK------CRFNSSSPV-CSASGKC 286

  Fly   578 VCGACECHKRPNPIEIISGKHCECDNFSCERNRN-QLCSGPDHGTCECGRCKCKPGWTGSNCGCQ 641
            .||.|:|:|     ..::||.|:|||.||....| ::|||  :|.|:||.|||:.||...:|.|.
 Worm   287 KCGQCQCNK-----PTVTGKFCQCDNDSCPLAVNGKVCSG--NGVCDCGVCKCEMGWERDDCSCS 344

  Fly   642 ESNDTCMPPGGGEICSGHGTCECGVCKCTVNDQGRFSGRHCEKCPTCSGRCQELKDCVQCQMYKT 706
            .:::.|:  ..||:||.:|.|||..|.|.:...|.|.|.. ||.|     ..|.||..:....:.
 Worm   345 TASNNCV--DNGELCSNNGRCECNRCVCNMGKTGAFCGSD-EKTP-----APEEKDKPESVPEEP 401

  Fly   707 GELKNGDDCARNCTQFVPVGVEKVEIDET---KDEQ 739
            ...:..||...:.      .:|| |:||:   |:||
 Worm   402 EATEKPDDMPSDS------DLEK-ELDESSSAKEEQ 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 39/177 (22%)
Integrin_B_tail 692..775 CDD:462325 13/51 (25%)
Integrin_b_cyt 803..843 CDD:462580
C05D9.3NP_001360655.1 vWFA 32..>123 CDD:469594 14/74 (19%)
I-EGF_1 219..247 CDD:465729 10/32 (31%)
gliding_CglD <239..370 CDD:468178 59/146 (40%)
Blue background indicates that the domain is not in the aligned region.

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