DRSC/TRiP Functional Genomics Resources

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Protein Alignment mys and Itgb2l

DIOPT Version :10

Sequence 1:NP_524793.2 Gene:mys / 44885 FlyBaseID:FBgn0004657 Length:846 Species:Drosophila melanogaster
Sequence 2:XP_006522991.1 Gene:Itgb2l / 16415 MGIID:1277979 Length:795 Species:Mus musculus


Alignment Length:795 Identity:236/795 - (29%)
Similarity:360/795 - (45%) Gaps:135/795 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ILAAIAGQTDAQKAAKLTAVSTCASKEKCHTCIQT-EGCAWCMQPDFKGQSRCYQNTSSLCPEEF 81
            :|..:||....:.|  |:.:.|..:...|..||:: ..||||.:.:|.|:.   :..|..|.   
Mouse     7 LLPVLAGLLSLESA--LSQLCTKDNVSTCQDCIRSGPSCAWCQKLNFTGRG---EPDSVRCD--- 63

  Fly    82 AYSPITVEQILVNNKLTNQYKAELAAGGGGSAMSGSSSSSYSSSSSSSSFYSQSSSGSSSASGYE 146
                 |.||:|:.. .|::|..:                                  ..|.:..:
Mouse    64 -----TPEQLLLKG-CTSEYLVD----------------------------------PKSLAESQ 88

  Fly   147 EYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSMEDDKAKLSTLGDKL 211
            |....:..|:.|:::.:.||..:....|:.:.:.:...||||:||.||.|.:...:.:.|||..|
Mouse    89 EDKERDQRQLSPRNVTVFLRPGQAATFKVDFQRTQDNSVDLYFLMGLSGSAQGHLSNVQTLGSDL 153

  Fly   212 SETMKRITNNFHLGFGSFVDKVLMPYVSTIPKKLEHPCENCKAPYGYQNHMPLNNNTESFSNEVK 276
            .:.:..|:.:..:||||.|:..                        :|:.:.|..::..|..|::
Mouse   154 LKALNEISRSGRIGFGSIVNMT------------------------FQHILKLTADSSQFQRELR 194

  Fly   277 NATVSGNLDAPEGGFDAIMQAIACRSQIGWREQARRLLVFSTDAGFHYAGDGKLGGVIAPNDGEC 341
            ...|||.|..|:|..||::|...|..:|||| ...|.||..||..||.|.|..||.....:||.|
Mouse   195 KQLVSGKLATPKGQLDAVVQVAICLGEIGWR-NGTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRC 258

  Fly   342 HLSPKGEYTHSTLQDYPSISQINQKVKDNAINIIFAVTASQLSVYEKLVEHIQGSSAAKLDNDSS 406
            ||. .|.|......||.|:.|:..|:.:|.|..||.|.:..:..||||...|...:..:|.:|||
Mouse   259 HLD-DGMYRSRGEPDYQSVVQLASKLAENNIQPIFVVPSRMVKTYEKLTTFIPKLTIGELSDDSS 322

  Fly   407 NVVELVKEEYRKISSSVEMKDNATGDV-KITYFSSCLSNG---PEVQTSKCDNLKEGQQVSFTAQ 467
            ||.:|::..|.|:||.|.:..:....: |:||.|.| |||   |...:..|..::...||:|...
Mouse   323 NVAQLIRNAYSKLSSIVVLNHSTIPSILKVTYDSYC-SNGTSNPGKPSGDCSGVQINDQVTFQVN 386

  Fly   468 IQLLKCPEDPRDWTQTIHISPVGINEVMQIQLTMLCSCPCENPGSIGYQVQANS-CSGHGTSMCG 531
            |...:|..:     |...|..:|..:.:.:::..||.|.|:.      |.|.:| |.|.|...||
Mouse   387 ITASECFRE-----QFFFIQALGFMDSVTVRVLPLCECQCQE------QSQHHSLCGGKGAMECG 440

  Fly   532 ICNCDDSYFGNKCEC-----SATDLTSKFANDTSCRADSTSTTDCSGRGHCVCGACECHKRPNPI 591
            ||.|:..|.|..|||     |:.||      :.|||.|::|.. |||.|.|:||.||||....|.
Mouse   441 ICRCNSGYAGKNCECQTQGPSSQDL------EGSCRKDNSSIM-CSGLGDCICGQCECHTSDIPN 498

  Fly   592 EIISGKHCECDNFSCERNRNQLCSGPDHGTCECGRCKCKPGWTGSNCGCQESNDTCMPPGGGEIC 656
            :.|.|::|||:|.:|||...|:|.||:.|.|.||||.|:.|:.||.|.|:.|...|:.....| |
Mouse   499 KEIYGQYCECNNVNCERYDGQVCGGPERGHCSCGRCFCRYGFVGSACQCRMSTSGCLNNRMVE-C 562

  Fly   657 SGHGTCECGVCKCTVNDQGRFSGRHCEKCPTCSGRCQELKDCVQCQMYKTGELKNGDDCARNCTQ 721
            ||||.|.|..|.|   |.| :....|||.|....||.|...|.:|       ||  |:.|..|.:
Mouse   563 SGHGRCYCNRCLC---DPG-YQPPLCEKRPGYFHRCSEYYSCARC-------LK--DNSAIKCRE 614

  Fly   722 -----FVPVGVEKVEIDETKDEQMCKFFDEDDCKFMFKYSEQGELH-VYAQENKECPAKV----F 776
                 |.............:|.:.|.      ..:.....:|.::: :|.:|:..| |::    .
Mouse   615 CWNLLFSNTPFSNKTCMTERDSEGCW------TTYTLYQPDQSDINSIYIKESLVC-AEISNTTI 672

  Fly   777 MLGIVMGVIAAIVLV 791
            :||:::||:.|::.:
Mouse   673 LLGVIVGVLLAVIFL 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mysNP_524793.2 INB 45..505 CDD:197563 126/464 (27%)
Integrin_B_tail 692..775 CDD:462325 17/88 (19%)
Integrin_b_cyt 803..843 CDD:462580
Itgb2lXP_006522991.1 vWFA 32..419 CDD:469594 126/464 (27%)
I-EGF_1 417..448 CDD:465729 14/36 (39%)
Blue background indicates that the domain is not in the aligned region.

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