DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr5a and Gr64b

DIOPT Version :10

Sequence 1:NP_511050.1 Gene:Gr5a / 44873 FlyBaseID:FBgn0003747 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_728921.1 Gene:Gr64b / 117480 FlyBaseID:FBgn0045478 Length:406 Species:Drosophila melanogaster


Alignment Length:421 Identity:124/421 - (29%)
Similarity:199/421 - (47%) Gaps:51/421 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SFHEAVAPVLAVAQCFCLMPVCGISAPTYRGLSFNRRSWRFWYSSLYLCSTSVDLAFSIRRVAHS 116
            :||.||:.||.::|.:.|:||..:.|.....:.|...|.|..||.|.......:....|..|...
  Fly     6 TFHRAVSNVLFISQIYGLLPVSNVRALDVADIRFRWCSPRILYSLLIGILNLSEFGAVINYVIKV 70

  Fly   117 VLDVRSVEPIVFHVSILIASWQFLNLAQLWPGLMRHWAAVER---RLP----GYTCCLQRARPAR 174
            .::..:...:..::..|:....|..||..||.:||.|..||:   |:|    |      ..|..|
  Fly    71 TINFHTSSTLSLYIVCLLEHLFFWRLAIQWPRIMRTWHGVEQLFLRVPYRFYG------EYRIKR 129

  Fly   175 RLKLVAFVLLVVSLMEHLLSI---------------ISVVYYDFCPRRSDPVESYLLGASAQLFE 224
            |:.:|..:::..:|:||.|.:               |:|.|:          ||........|:.
  Fly   130 RIYIVFTIVMSSALVEHCLLLGNSFHLSNMERTQCKINVTYF----------ESIYKWERPHLYM 184

  Fly   225 VFPYSNW----LAWLGKIQNVLLTFGWSYMDIFLMMLGMGLSEMLARLNRSLEQQVRQPMPEAYW 285
            :.||..|    |.|:    |..:.:..|:.|.|:|.:|:||:....:|.|.:....|:.||..:|
  Fly   185 ILPYHFWMLPILEWV----NQTIAYPRSFTDCFIMCIGIGLAARFHQLYRRIAAVHRKVMPAVFW 245

  Fly   286 TWSRTLYRSIVELIREVDDAVSGIMLISFGSNLYFICLQLLKSI-NTMPSSAHAVYFYFSLLFLL 349
            |..|..|.::..|:..:|.|::.::|::||:|:.|||.||..|. |........:.|::||.|.:
  Fly   246 TEVREHYLALKRLVHLLDAAIAPLVLLAFGNNMSFICFQLFNSFKNIGVDFLVMLAFWYSLGFAV 310

  Fly   350 SRSTAVLLFVSAINDQAREPLRLLRLVPLKGYHPEVFRFAAELASDQVALTGLKFFNVTRKLFLA 414
            .|:...:...|:|||..|:.:..||.||.:.:..||.||:.:|.:|..||:|..||.:||.|.||
  Fly   311 VRTLLTIFVASSINDYERKIVTALRDVPSRAWSIEVQRFSEQLGNDTTALSGSGFFYLTRSLVLA 375

  Fly   415 MAGTVATYEL----VLIQFHEDKKTWDCSPF 441
            |..|:.||||    |:.|....:||..|..:
  Fly   376 MGTTIITYELMISDVINQGSIRQKTQYCREY 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr5aNP_511050.1 7tm_7 35..437 CDD:473258 123/415 (30%)
Gr64bNP_728921.1 Trehalose_recp 3..400 CDD:336318 121/413 (29%)

Return to query results.
Submit another query.