Protein Alignment: sub and cmet

• Sequence 1: NP_001286548.1
• Gene: sub
• FlyBaseID: FBgn0003545
• Length: 628
• Species: Drosophila melanogaster
• Sequence 2: NP_524993.3
• Gene: cmet
• FlyBaseID: FBgn0040232
• Length: 2189
• Species: Drosophila melanogaster
• Alignment Length: 612
• Identity: 152/613 (25%)
• Similarity: 241/613 (39%)
• Gaps: 201/613 (33%)

  Fly    77 SAADSSNVETGPQVFLRLRPVKDASKAYIVSEEANVLITSCKVDSTSNNVNRMEKH---FGFTSI 138
            ||.::|::    ||.:::||.:..             :||........:::..:.|   :.|..:
  Fly     2 SAKNASSI----QVCIKVRPCEPG-------------LTSLWQVKERRSIHLADSHAEPYVFDYV 49

  Fly   139 FDSTVGQRDIYDTCVGPKIMEEECV-----TIMTYGTSGSGKTYTLLGDDVRAGIIPRALENIFT 198
            ||.....::::|...  |.:...|:     ||..||.:.||||||::||:...|::..|.:.||.
  Fly    50 FDEGASNQEVFDRMA--KHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQ 112

  Fly   199 IYQDTVFRSPKLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFETKA 263
                                                                         :..:
  Fly   113 -------------------------------------------------------------QISS 116

  Fly   264 STDVSVLVWVSFVEIYNELVYDLLAIPPKQDKLGEVPRKN--LKIVGNKGHVFIKGLTSV----- 321
            .|:...|:.|.::|||||.:||||            .:||  |||     |....|:.:|
  Fly   117 ETERDFLLRVGYIEIYNEKIYDLL------------NKKNQDLKI-----HESGNGIVNVNCEEC 164

  Fly   322 FVTSSEEALRLLRLGQQRSTYASTSVNANSSRSHCVFTVDILKYNRS-----GITTQSSYKFCDL 381
            .:||..:.||||.||.:..|...|::|..|||||.:|.: |::..:|     ....||.....||
  Fly   165 IITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKI-IIESRKSDHSDDDAVIQSVLNLVDL 228

  Fly   382 AGSERVNNTGTSGLRLKEAKNINTSLMVLGRCLDAASTVQKKKNAD--IIPYRDSKLTMLLQAAL 444
            |||||.:.||..|.||||..:||.||:.|...:.:.|     :|||  ...|||||||.:|||:|
  Fly   229 AGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLS-----ENADNRFTNYRDSKLTRILQASL 288

  Fly   445 LGKEKLAMIVTVTPLDKYYEENLNVLNFASIAKNIIFKEPVIKQHRVSYCGFMEFSKMSTCEGGD 509
            .|....::|.|:.|  ...||:.:.|:||:.||.|..|..|  ...||....|:
  Fly   289 GGNAFTSIICTIKP--SIMEESQSTLSFATRAKKIRIKPQV--NEMVSDATMMK----------- 338

  Fly   510 YTKELEDENVRLQLEIEQLKYDHVLQMQLLEEKLRRELTATYQEIIQNNKKQYEDECEKKLLIAQ 574
                      ||:.||:      ||:.:|.||:.:.|    .|:.:::.::|.:.:.. |::...
  Fly   339 ----------RLEREIK------VLKDKLAEEERKNE----NQQKVEHLERQIKHDMH-KIICGH 382

  Fly   575 RESEFMLSSQRRRY-----------------EEQIEDLK--------------------DEIEEL 602
            ..|:.....:||.:                 |::|:...                    |.|.:.
  Fly   383 SLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKT 447

  Fly   603 KNPASDTDISDDPN---ESKSPIEILD 626
            .|.....||..:.|   |...|.|.:|
  Fly   448 INILGSLDIGTESNSISEEFLPAECID 474

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sub	NP_001286548.1	KISc	89..477	CDD:276812	114/410 (28%)
		Kinesin	93..479	CDD:278646	113/408 (28%)
		GBP_C	<512..603	CDD:303769	20/128 (16%)
		coiled coil	576..586	CDD:293879	2/10 (20%)
		coiled coil	592..603	CDD:293879	3/31 (10%)
cmet	NP_524993.3	KISc	8..328	CDD:214526	118/427 (28%)
		Motor_domain	8..321	CDD:277568	115/418 (28%)
		Smc	<680..1449	CDD:224117
		TMPIT	779..>867	CDD:285135
		Smc	1042..1910	CDD:224117

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C122345608
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			P	PTHR24115
RoundUp	0	0.000	Not matched by this tool.
	2	2.030