DRSC/TRiP Functional Genomics Resources

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Protein Alignment sub and Klp54D

DIOPT Version :10

Sequence 1:NP_611260.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001303355.1 Gene:Klp54D / 47216 FlyBaseID:FBgn0263076 Length:760 Species:Drosophila melanogaster


Alignment Length:632 Identity:170/632 - (26%)
Similarity:239/632 - (37%) Gaps:208/632 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SDTESEYKYQSSEATEG--------ASCATSAADSSNVETGPQVFLRLRPVKDASK--------- 102
            |...:.|..:|.|...|        ||.:|.:.:.|..|....|.:|:||:.|..|         
  Fly   126 SSRNTPYFLRSRENEIGSADTLEIVASKSTGSEECSTPEDNINVVVRVRPLNDKEKRDRHGSTLQ 190

  Fly   103 ----AYIVSEEANVLITSCKVDSTSNNVNRMEKH-------FGFTSIFDSTVGQRDIYDTCVGPK 156
                ..::.|              .|:|.:...|       |.:..:|:....|.||.|.....:
  Fly   191 FPGNGQVILE--------------GNDVGQKRSHNRDSVRVFTYNVVFEPGATQEDILDYSGIKR 241

  Fly   157 IMEE-----ECVTIMTYGTSGSGKTYTLLG-----------DDVRAGIIPRALENIFTIYQDTVF 205
            |:|.     .| |...||.:|||||:||.|           .|.|.|:|               |
  Fly   242 IIEMGIEGFSC-TAFCYGQTGSGKTHTLTGPPDLFVGKPNPKDPRHGLI---------------F 290

  Fly   206 RSPKLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFE-TKASTDVSV 269
            ||           ||                                    ::|: .|...||:.
  Fly   291 RS-----------FL------------------------------------YLFQLIKNRKDVNY 308

  Fly   270 LVWVSFVEIYNELVYDLLAIPPKQDKLGEVPRKNLKIVGNK--GHVFIKGLTSVFVTSSEEALRL 332
            ::..||:|||||.|.|||       ..|.. ||.|.:..:|  |..|::.|.:|.....::.|.:
  Fly   309 VLKASFMEIYNERVIDLL-------NPGSA-RKPLAVRWSKKSGGFFVENLFTVDCEELDDLLAV 365

  Fly   333 LRLGQQRSTYASTSVNANSSRSHCVFTVDILKYNRSG----ITTQSSYKFCDLAGSERVNNTGTS 393
            |..|.:.....|.::|.:|||||.:.||.||...::.    ::......|.||||||....|.:.
  Fly   366 LEEGMRNRAVGSHAMNDHSSRSHTILTVHILSDQQTDGGVFLSKHGKINFVDLAGSELTKKTMSE 430

  Fly   394 GLRLKEAKNINTSLMVLGRCLDAASTVQKKKNADIIPYRDSKLTMLLQAALLGKEKLAMIVTVTP 458
            |..|:||.|||.||||||.|:.:.|  ..||....||||||:||.||..:|.|.....||..|:|
  Fly   431 GKTLEEANNINKSLMVLGYCISSLS--DSKKRTGHIPYRDSQLTKLLADSLAGNGVTLMIACVSP 493

  Fly   459 LDKYYEENLNVLNFASIAKNIIFKEPVIKQ--------------HRVSYCGFMEFSKMSTC---- 505
            ....:.|.||.|.:||.||.|..| ||||.              |.:.    ||...:...    
  Fly   494 AHYNHAETLNTLRYASRAKRIRTK-PVIKMDPREALILSLKRDIHALQ----MENDHLKAALNLH 553

  Fly   506 -----EGGDYTKELEDENVRLQL--------------------EIEQLKYDHVLQMQLLE-EKLR 544
                 .||.....||     |||                    |::..:...::::.::| |.||
  Fly   554 HQAAPNGGPVENLLE-----LQLDRVSSGGGVPVPKVDLQRLPELDGSELAELVKLYMVENESLR 613

  Fly   545 ---------RELTATYQEII--QNNK--KQYED---ECEKKLLIAQR 575
                     ||.....|||:  :|.:  |:.||   .|.:..||..|
  Fly   614 QENNHLFTVRETILRDQEIVCRENERLLKKLEDVNKVCVRSPLIPAR 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subNP_611260.1 KISc 89..477 CDD:276812 124/430 (29%)
GBP_C <512..603 CDD:293879 23/101 (23%)
coiled coil 576..586 CDD:293879 170/632 (27%)
coiled coil 592..603 CDD:293879
Klp54DNP_001303355.1 KISc 166..520 CDD:214526 129/441 (29%)
Blue background indicates that the domain is not in the aligned region.

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