Protein Alignment: sub and Kif3C

• Sequence 1: NP_001286548.1
• Gene: sub
• FlyBaseID: FBgn0003545
• Length: 628
• Species: Drosophila melanogaster
• Sequence 2: NP_651939.4
• Gene: Kif3C
• FlyBaseID: FBgn0039925
• Length: 649
• Species: Drosophila melanogaster
• Alignment Length: 646
• Identity: 154/647 (24%)
• Similarity: 237/647 (37%)
• Gaps: 221/647 (34%)

  Fly    81 SSNVETGPQVFLRLRPVKDASKAYIVSEEANVLITSCKVDSTSNNVNRMEKHFGFTSIFDSTVGQ 145
            |.|:    :|.:|.||:....|.........:...:..|.:.|..::: :|.|.|.|:::.....
  Fly     2 SENI----KVVVRCRPMNQTEKERNCQNIVEINEFAVSVTNPSARISQ-QKKFIFDSVYNMKTDT 61

  Fly   146 RDIYDTCVGPKIMEEECV------------TIMTYGTSGSGKTYTLLGDD---VRAGIIPRALEN 195
            ..|||         |.|.            ||..||.:|.|||:|:.||:   ...||||:..
  Fly    62 EVIYD---------EMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNSTGIIPKCF-- 115

  Fly   196 IFTIYQDTVFRSPKLKLINGSIVFLQDDASLKELQIRKKLLDLCPDISAHHQRLKQVIDGDHMFE 260
                                                                        ||:||
  Fly   116 ------------------------------------------------------------DHIFE 120

  Fly   261 -TKASTDVSVLVWVSFVEIYNELVYDLLAIPPKQDKLGEVPR--KNLKIVGNKGHVFIKGLTSVF 322
             ...:|:|..|..|:::|||||.:.|||   .|.:....:..  |.|..:|    |.:..||:..
  Fly   121 RISMTTNVRYLALVTYLEIYNERIRDLL---NKNENTNVINHFLKELPGIG----VSVPTLTTQP 178

  Fly   323 VTSSEEALRLLRLGQQRSTYASTSVNANSSRSHCVFTVDI--------LKYNRSGITTQSSYKFC 379
            |.::.:....|..|.:....|:|.:|.||||||.:||:.:        :..:..|...:......
  Fly   179 VVNANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLEQSPFLNSIGSDAFGGICRGKLSLV 243

  Fly   380 DLAGSERVNNTGTSGLRLKEAKNINTSLMVLGRCLDAASTVQKKKNADIIPYRDSKLTMLLQAAL 444
            |||||||...||..|.|||||..||.||..||..:  :|.|..|  |..:|:||||||.|||.:|
  Fly   244 DLAGSERQRKTGAQGDRLKEASQINLSLSALGNVI--SSLVDGK--AKHVPFRDSKLTRLLQDSL 304

  Fly   445 LGKEKLAMIVTVTPLDKYYEENLNVLNFASIAKNI------------------------------ 479
            .|..|..||..::|.|.:|:|.::.|.:||.||||
  Fly   305 GGNTKTLMISCISPTDIHYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRMLQ 369

  Fly   480 --------------IFKEPV-IKQH---------------RVSYCGFMEFSKMSTCEGGDYTKEL 514
                          |.|.|: |.||               |.....|...:.:.|.......:..
  Fly   370 ESQQIINKNNDPNKIIKSPLKIIQHTNMNSTKNVQIIDLGRNCKASFKTNNSILTKPNFPLIQSK 434

  Fly   515 EDENVRLQLEIEQLKY-----DHVLQMQLLEEKLRRELTAT------------------------ 550
            |:..::.:..|:.:|.     :.:...:|.|:.:.|:..|.
  Fly   435 EEVQLQARSRIDLIKRSLIGGERIHDFELKEKHMARKYAAQRHLSAIAIALSRVKCEDRDLLQGH 499

  Fly   551 YQEIIQ--NNKKQYEDECEKKLLIAQRE-----SEFMLSSQRRRYEEQIEDLKDEIEELKN 604
            |..|.|  :.|..|..:|::|:.:.:.|     |||.|            |.:|.::|::|
  Fly   500 YATITQEIDIKNDYIRKCKEKIKMLEMEVSDLNSEFQL------------DREDYLDEIRN 548

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sub	NP_001286548.1	KISc	89..477	CDD:276812	117/414 (28%)
		Kinesin	93..479	CDD:278646	118/412 (29%)
		GBP_C	<512..603	CDD:303769	22/127 (17%)
		coiled coil	576..586	CDD:293879	5/15 (33%)
		coiled coil	592..603	CDD:293879	3/11 (27%)
Kif3C	NP_651939.4	Motor_domain	3..339	CDD:277568	120/423 (28%)
		Kinesin	10..339	CDD:278646	118/412 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C122354869
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			P	PTHR24115
RoundUp	0	0.000	Not matched by this tool.
	2	2.030