DRSC/TRiP Functional Genomics Resources

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Protein Alignment sub and CG32318

DIOPT Version :10

Sequence 1:NP_611260.1 Gene:sub / 44870 FlyBaseID:FBgn0003545 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_995952.1 Gene:CG32318 / 2768976 FlyBaseID:FBgn0052318 Length:164 Species:Drosophila melanogaster


Alignment Length:174 Identity:40/174 - (22%)
Similarity:72/174 - (41%) Gaps:48/174 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 QVFLRLRPVKDASKAYIVSEEANV-----LITSCKVDSTSNNVNRMEKHFGFTSIFDSTVGQRDI 148
            ||::|:||:....:....:|..:|     ::|...:||      ::.|.|.|...|.....|.|:
  Fly    21 QVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDS------KLTKKFTFDRSFGPESKQCDV 79

  Fly   149 YDTCVGPKIME----EECVTIMTYGTSGSGKTYTLLGDDVRAGIIPRALENIFTIYQDTVFRSPK 209
            |...|.|.|.|    ..| |:..||.:         |:::|.   |::|.......:|    ..|
  Fly    80 YSVVVSPLIEEVLNGYNC-TVFAYGQT---------GNNLRP---PKSLYIEVRCMED----YGK 127

  Fly   210 LKLINGSIVFLQDD-------ASLKELQIRKKLLDLCPDISAHH 246
            .:|.:|.::.|:.:       |.::.| :|:.:|        ||
  Fly   128 FELDDGEVIHLKKNSQHYLPRAQVESL-VRQGIL--------HH 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
subNP_611260.1 KISc 89..477 CDD:276812 40/174 (23%)
GBP_C <512..603 CDD:293879
coiled coil 576..586 CDD:293879
coiled coil 592..603 CDD:293879
CG32318NP_995952.1 Motor_domain 17..>106 CDD:473979 25/100 (25%)
GINS_B_Psf1 115..163 CDD:412032 12/61 (20%)
Blue background indicates that the domain is not in the aligned region.

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