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Protein Alignment m and matn3a
DIOPT Version :10
| Sequence 1: | NP_572747.1 |
Gene: | m / 44835 |
FlyBaseID: | FBgn0002577 |
Length: | 682 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001004007.1 |
Gene: | matn3a / 445503 |
ZFINID: | ZDB-GENE-040822-21 |
Length: | 337 |
Species: | Danio rerio |
| Alignment Length: | 115 |
Identity: | 28/115 - (24%) |
| Similarity: | 41/115 - (35%) |
Gaps: | 17/115 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 191 SGIVPLGSTLTLV-VAINDYRGEFDMRVKSCVASDGSGHVINLSDEFGCVLRPKMISRFLKARAP 254
||..|....::.| :.:.|.|.:..:...|..|......:..:. |.|..|.|..|.|..|
Zfish 159 SGARPKSKNISKVAIIVTDGRPQDQVEEVSAAARASGIEIYAVG-----VDRADMRSLKLMASNP 218
Fly 255 --DERATVITYAFFHAF--KFPDALSVHIKCKVEICR--HGCLDHCQNTG 298
|....|.||...... ||.:.| |.::.|. |.|...|.::|
Zfish 219 LEDHVFYVETYGVIEKLTSKFRETL-----CGMDACAMGHDCEHICVSSG 263
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| m | NP_572747.1 |
ZP |
55..286 |
CDD:214579 |
23/99 (23%) |
| matn3a | NP_001004007.1 |
vWFA |
61..282 |
CDD:469594 |
28/115 (24%) |
| Matrilin_ccoil |
292..334 |
CDD:463070 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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