DRSC/TRiP Functional Genomics Resources

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Protein Alignment m and neo

DIOPT Version :10

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster


Alignment Length:313 Identity:67/313 - (21%)
Similarity:118/313 - (37%) Gaps:53/313 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 MERPDG----MPNIVSLEVMCGKDHMDVHLTFSHPFEGIVSSKGQHSDPRCVYVPPSTGKTFFSF 99
            :|.|:.    :.:..::.:.||...|...:..|..|.|.|.:||   .|:...|...:... |..
  Fly   362 LEVPEASTYELTSCYNVTIECGGGDMLARIRTSKLFNGKVYAKG---SPKSCSVDVKSALD-FEL 422

  Fly   100 RISYS--RCGTKPDLNGQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKTASKPPMVIADLD 162
            |::|.  .|..:....|: |.|.:::|:...::...|....|.|: ::...|:.|         :
  Fly   423 RMNYHDLECNVRQSTAGR-YVNDIIIQHHDMIVTSSDLGLALACQ-YDLTNKSVS---------N 476

  Fly   163 VIQLDFRGD------------NVDCWMEIQHGKGPWAPPVSGIVPLGSTLTLVVAINDYRGEFDM 215
            .:.||.|||            :.:..|.|....|   ..:.....:|..|.|...|.|.:..:::
  Fly   477 GVDLDVRGDIMPALSEEVIVESPNVIMRITSRDG---SDMMRSAEVGDPLALKFEIVDEQSPYEI 538

  Fly   216 RVKSCVASDG-SGHVINLSDEFGCVLRPKMISRFLKARAPDERATVITYAFFHAFKFPDALSVHI 279
            .::..||.|| ....|.|.|..||.....::....|.....:    :..:.|.|||||.:..|..
  Fly   539 FIRELVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKGSVSGK----MLLSNFDAFKFPSSEVVQF 599

  Fly   280 KCKVEICRHGCLD-HCQNTGVGGGGGGSGESLGLGLGLGLTNANERKDVHMSD 331
            :..|..|...|.. .|:....      |||...|     |:...:|:.::.:|
  Fly   600 RALVTPCMPSCEPVQCEQEDT------SGEFRSL-----LSYGRKRRSLNTTD 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 55/245 (22%)
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635 2/10 (20%)
ZP 381..615 CDD:214579 57/255 (22%)
Blue background indicates that the domain is not in the aligned region.

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