DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m and cut-5

DIOPT Version :10

Sequence 1:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001257100.1 Gene:cut-5 / 187677 WormBaseID:WBGene00011104 Length:395 Species:Caenorhabditis elegans


Alignment Length:279 Identity:57/279 - (20%)
Similarity:106/279 - (37%) Gaps:61/279 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VMCGKDHMDVHLTFS----------------HPFEGIVSSKGQHSDPRC-VYVPPSTGKTFFSFR 100
            |.||.|..:|::..|                ..|.|:...:....:|.| .:...:......|.|
 Worm    30 VECGDDFFEVNIYHSCSCVGNFIIKVKFDTRTTFHGLAFVQNHLDNPDCRSFASKTDSAKNSSLR 94

  Fly   101 ISYSRC------GTKPDLNGQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKTASKPPMVIA 159
            :::.:|      .|.|  .|.|....|||.::.:.|...|...:::| ::.:.|:...|      
 Worm    95 LTFDQCAIEKRHSTSP--RGLFLSTNVVVAFNPEFLTKNDRVFKVQC-FYMEMERRIQK------ 150

  Fly   160 DLDVIQLDFRGDNVD--------CWMEIQHGKGPWAPPVSGIVPLGSTLTLVV-----AINDYRG 211
               |||:......:.        |..|:..| .|..|||     ..:|:..:|     ...::..
 Worm   151 ---VIQISMPPPTMHSKQLNMPVCKYEVLDG-SPTGPPV-----YFATVGQMVYHKWTCDTEHEN 206

  Fly   212 EFDMRVKSCVASDGSGHVINLSDEFGCVLRPKMISRFLKARAPDERATVITYAFFHAFKFPDALS 276
            .|.|.|.||...||:|..:.|.::.||.|...:::..      :....::.....|.:|:.|..:
 Worm   207 TFCMLVHSCFVDDGNGQRVQLLNDKGCALDKYLLTNL------EYPTDLMAGREAHVYKYADRDN 265

  Fly   277 VHIKCKVEI-CRHGCLDHC 294
            ::..|::.| .:...||:|
 Worm   266 MYFDCQISITVKEPGLDYC 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mNP_572747.1 ZP 55..286 CDD:214579 53/267 (20%)
cut-5NP_001257100.1 ZP 53..290 CDD:214579 51/256 (20%)

Return to query results.
Submit another query.