DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(bx) and BDF1

DIOPT Version :10

Sequence 1:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster
Sequence 2:NP_013503.1 Gene:BDF1 / 851115 SGDID:S000004391 Length:686 Species:Saccharomyces cerevisiae


Alignment Length:580 Identity:105/580 - (18%)
Similarity:173/580 - (29%) Gaps:239/580 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly  2221 NNFEDQDNIEQHRLKYESEDLKRCSLQTNNIEIDADTLATTYEANSTIKDIAINNGDDQENS--K 2283
            |...:|.::::.||..::.......|..|.||  ..|||.              ||::..|:  .
Yeast    44 NPANNQLHLKKARLDGDALTSSPAGLAENGIE--GATLAA--------------NGENGYNATGS 92

  Fly  2284 CAETENSNITTNESFAGT--SSLLEGSEHDEPTNL----AGLDISETDLEN---------KQNES 2333
            .||.|...:...|...||  ..|.|.|:.:.|..:    |.....|.|:.|         :|..:
Yeast    93 GAEDEQQGLKKEEGGQGTKQEDLDENSKQELPMEVPKEPAPAPPPEPDMNNLPQNPIPKHQQKHA 157

  Fly  2334 FVV---------TRGYIQ---------KSISNALKQGNLSPELEEKLVCMQKQQENANSTNEWET 2380
            .:.         .|.::|         ....|.:|:......:|.||           :...:| 
Yeast   158 LLAIKAVKRLKDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKL-----------NVGAYE- 210

  Fly  2381 CSRGSVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRILKKNRSKNDEVAELGEQKQSQL 2445
                       .|.:.|:|....:..|::          ||       ..|..::::....|:..
Yeast   211 -----------VPEQITEDFNLMVNNSIK----------FN-------GPNAGISQMARNIQASF 247

  Fly  2446 ERHKELLKKNILRKRSLLERNLQSEIHEDVKTKVQRHVRPLSNASPDEQSENERSGEPNLDFKRT 2510
            |:|  :|.........::.:..:|...||....::|           .|:.|             
Yeast   248 EKH--MLNMPAKDAPPVIAKGRRSSAQEDAPIVIRR-----------AQTHN------------- 286

  Fly  2511 EVQNPRHGAGRPKKLTR--KKEKLYCICRTPYDDTKFYVGCDLCSNWFHGDCVSITEEASKKLSE 2573
                     ||||:...  |.:.:|     ||:..|                     ..||:   
Yeast   287 ---------GRPKRTIHPPKSKDIY-----PYESKK---------------------PKSKR--- 313

  Fly  2574 FICIDCKRARETQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRK 2638
                                                          ||...:|        ||  
Yeast   314 ----------------------------------------------LQQAMKF--------CQ-- 322

  Fly  2639 NDANAANMKKLTSNDVEELKNLIKQMQLHKSA---WPFMEPVDP--KEAPDYYKVIKEPMDLKRM 2698
                                :::|::...|.|   :||:|||||  ...|.|:..:||||||..:
Yeast   323 --------------------SVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTI 367

  Fly  2699 EIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRENVFD 2758
            ..||....|..:.:|..|:..:|.||..:||..:........||..|..|..: |.|:.|
Yeast   368 AKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWAD-RPNLDD 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(bx)NP_001261188.1 DDT 188..248 CDD:214726
WHIM1 286..330 CDD:464774
PHD1_BPTF 341..383 CDD:277034
WSD 405..>441 CDD:464775
PHD_SF 2533..2579 CDD:473978 6/45 (13%)
PHD2_3_BPTF 2589..2635 CDD:277035 3/45 (7%)
Bromo_gcn5_like 2653..2752 CDD:99941 32/103 (31%)
BDF1NP_013503.1 COG5076 1..373 CDD:227408 90/524 (17%)
Bromodomain <339..417 CDD:445827 28/77 (36%)
PTZ00108 <386..647 CDD:240271 12/42 (29%)
BET 527..589 CDD:435704
Blue background indicates that the domain is not in the aligned region.

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