DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1gamma and sspA

DIOPT Version :10

Sequence 1:NP_652000.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_417696.1 Gene:sspA / 944744 ECOCYCID:EG10977 Length:212 Species:Escherichia coli


Alignment Length:204 Identity:39/204 - (19%)
Similarity:71/204 - (34%) Gaps:45/204 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TLYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAE------- 62
            ||::.|.:..:::..|.....|...::....|   .|...:.:...|...||.....|       
E. coli    12 TLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEK---DNPPQDLIDLNPNQSVPTLVDRELTLWESR 73

  Fly    63 --GQYLSESNAIAYLLANEQLRGGKCPFVQAQVQQ-WISFADNEIVPASCAWVFPLLGILPQQKN 124
              .:||.|......|:....:..|:......:::: |.:.. |.|:..|.:              
E. coli    74 IIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLM-NTIINGSAS-------------- 123

  Fly   125 STAKQEAEAVLQQLNQKL--------QDATFLAGERITLADIVVFSSLLHLYEYVLE---PSVRS 178
                 ||:|..:||.::|        |...||:.| .:|.|..:...|..|.:..:|   |..:.
E. coli   124 -----EADAARKQLREELLAIAPVFGQKPYFLSDE-FSLVDCYLAPLLWRLPQLGIEFSGPGAKE 182

  Fly   179 AFGNVNRWF 187
            ..|.:.|.|
E. coli   183 LKGYMTRVF 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1gammaNP_652000.1 GST_N_EF1Bgamma 4..79 CDD:239342 15/82 (18%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 23/110 (21%)
EF1G 273..376 CDD:459888
sspANP_417696.1 sspA 1..211 CDD:236537 39/204 (19%)
Blue background indicates that the domain is not in the aligned region.

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