DRSC/TRiP Functional Genomics Resources

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Protein Alignment nerfin-1 and Insm1

DIOPT Version :10

Sequence 1:NP_524783.1 Gene:nerfin-1 / 44786 FlyBaseID:FBgn0028999 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_058585.2 Gene:Insm1 / 53626 MGIID:1859980 Length:521 Species:Mus musculus


Alignment Length:489 Identity:125/489 - (25%)
Similarity:175/489 - (35%) Gaps:158/489 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQIQTPIPIPAPAEP-----IEKLSH---------------PHSIGIQLQHKGMPHGLGLLTTVA 46
            |:.:.|:|.|.|..|     :.:.:|               |...|.:..|.|.|.........:
Mouse    39 ARAEPPVPSPGPLPPPPPPALAERAHAALAAALACAPGPPPPPPPGPRAAHFGNPEAAHPAPLYS 103

  Fly    47 SLPP--------KYRSRYLNLKTRCEIPLDLTLKLPSP--------------------------- 76
            ...|        ||..|..||.:    |:... ..|:|                           
Mouse   104 PTRPVSREHEKHKYFERSFNLGS----PVSAE-SFPTPAALLAGGGSGANGAGGGGGGTCGGDAL 163

  Fly    77 -LPSSDVPMAATFAEVYSENTSASSSEVQGEVTKVEELPVKPPTPPQS---PAGKRKLSRESYDD 137
             ...:::.|...|        ||.:...:|..|       .||..|.:   |.|||         
Mouse   164 LFAPAELKMGTAF--------SAGAEAARGPGT-------GPPLSPAAALRPPGKR--------- 204

  Fly   138 EPAKMAKKEEEVPVETVESTPAKPVKVAESAPKTNKASTSSGKPSRNKATRKLKF-DEETSSPVS 201
                                ||.|..||...|.....:.|:.||   ||.|||.| ||.|:|||.
Mouse   205 --------------------PAPPAAVATEPPAKAAKAPSAKKP---KAIRKLHFEDEVTTSPVL 246

  Fly   202 GTVIRPLEDITDGSMQYSNGDIDPKYNIVEITEETKAELAAIKNVIGDYVCRLCKIKFEDAFGLA 266
            |..|:             .|.:          |..:.........:|:::|:|||.::.|.|.||
Mouse   247 GLKIK-------------EGPV----------EAPRGRAGGATRPLGEFICQLCKEEYADPFALA 288

  Fly   267 RHRCACIVLLEYRCPECGKQFNCPANLASHRRWHKPR-----------KEASKKENRNTTNQPEK 320
            :|:|:.||.:|||||||.|.|:|||||||||||||||           :.|::.|.|........
Mouse   289 QHKCSRIVRVEYRCPECAKVFSCPANLASHRRWHKPRPVPAAARAPEPEAATRAEAREAAGGGSS 353

  Fly   321 QQQ------VEKKSEEELAFDCQECGKKFKRAAYLRKHQLTH----QKKEKPAEKQLEMKPTTTT 375
            .:.      |.:...|:..::|..|.|||:|.||||||.|.|    |.|..|........|....
Mouse   354 DRDTPSPGGVSESGSEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPPPPPPPPPPAEDI 418

  Fly   376 ITGSFHFNQAVSTSSSASSSHSDEGVYVVGSNAR 409
            :  :|:..........||......||..:.:.|:
Mouse   419 L--AFYAGPDEKAPQEASGDGEAAGVLGLSATAQ 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nerfin-1NP_524783.1 C2H2 Zn finger 252..272 CDD:275368 10/19 (53%)
C2H2 Zn finger 280..300 CDD:275368 16/19 (84%)
zf-C2H2 334..356 CDD:395048 13/21 (62%)
C2H2 Zn finger 336..356 CDD:275368 13/19 (68%)
Insm1NP_058585.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..59 6/19 (32%)
SNAG domain. /evidence=ECO:0000305|PubMed:24227653 1..20
Required and sufficient for interaction with KDM1A. /evidence=ECO:0000250|UniProtKB:Q01101 2..7
Necessary for interaction with CCND1. /evidence=ECO:0000250 43..56 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..107 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..230 18/88 (20%)
C2H2 Zn finger 274..294 CDD:275368 10/19 (53%)
C2H2 Zn finger 302..322 CDD:275368 16/19 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..369 10/48 (21%)
zf-C2H2 373..395 CDD:395048 13/21 (62%)
C2H2 Zn finger 375..395 CDD:275368 13/19 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..419 4/20 (20%)
C2H2 Zn finger 454..475 CDD:275368
C2H2 Zn finger 482..503 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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