DRSC/TRiP Functional Genomics Resources

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Protein Alignment lolal and br

DIOPT Version :10

Sequence 1:NP_524778.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster
Sequence 2:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster


Alignment Length:117 Identity:63/117 - (53%)
Similarity:95/117 - (81%) Gaps:0/117 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MSSDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKALLEENP 66
            |...|.|.|:||::|:::.::|.:|||:::|.||||||||::.|||::|||||||||:.||:..|
  Fly     1 MDDTQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTP 65

  Fly    67 SKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE 118
            .|||:|:|:||:::.|.|::||:|.|||||.|:.|.:|||||:.|:|.||.:
  Fly    66 CKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQ 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolalNP_524778.1 BTB_POZ_BAB-like 32..115 CDD:349624 50/82 (61%)
brNP_001162638.2 BTB_POZ_BAB-like 31..114 CDD:349624 50/82 (61%)
C2H2 Zn finger 712..729 CDD:275368
C2H2 Zn finger 742..763 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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