DRSC/TRiP Functional Genomics Resources

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Protein Alignment lolal and LOC1273860

DIOPT Version :10

Sequence 1:NP_524778.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster
Sequence 2:XP_312886.5 Gene:LOC1273860 / 1273860 VectorBaseID:AGAMI1_002030 Length:824 Species:Anopheles gambiae


Alignment Length:130 Identity:54/130 - (41%)
Similarity:82/130 - (63%) Gaps:10/130 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKALLEE-NP 66
            ||.|||.|:|::.|.::::|...|.|:...|||||..|||..|||::||||||.:|..|... :.
Mosquito    46 SSPQQFCLRWHNHQASLLSSLPLLLDQSHLTDVTLMAEGQKIKAHRVVLSACSTFFSELFRTLDG 110

  Fly    67 SKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE---------TPSS 122
            :::|:::|...||..:.|::.|||:|||||.:.|:...|..|:.|.:||||:         |||:
Mosquito   111 AQYPVVVLPGASYHAVAALITFMYSGEVNVYEAQISVLLSLAETLGIKGLADFNSNPNKSSTPST 175

  Fly   123  122
            Mosquito   176  175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolalNP_524778.1 BTB_POZ_BAB-like 32..115 CDD:349624 36/83 (43%)
LOC1273860XP_312886.5 BTB_POZ_BAB-like 75..159 CDD:349624 36/83 (43%)
C2H2 Zn finger 600..620 CDD:275371
C2H2 Zn finger 627..648 CDD:275371
Blue background indicates that the domain is not in the aligned region.

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