DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cnx99A and Calr

DIOPT Version :10

Sequence 1:NP_477157.1 Gene:Cnx99A / 44643 FlyBaseID:FBgn0015622 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_031617.1 Gene:Calr / 12317 MGIID:88252 Length:416 Species:Mus musculus


Alignment Length:543 Identity:159/543 - (29%)
Similarity:233/543 - (42%) Gaps:152/543 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LAYESPVIDAKKFHFADHFDDVEESRKRWVLSQAKKD--DIAEEISKYDGIWNWESPQRIVWAND 122
            ||...|.|     :|.:.|.|.:....|||.|:.|.|  .......|:.|...          .|
Mouse    14 LAAADPAI-----YFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLE----------KD 63

  Fly   123 LGLVLKSKAKHAAIAAPLRKPFEFKSDKPLVVQYEVTLQEGQECGGSYLKLLSAGKDTEQLKAFN 187
            .||.....|:..|::|.. :||..|. :.||||:.|..::..:|||.|:||..:|.|.   |..:
Mouse    64 KGLQTSQDARFYALSAKF-EPFSNKG-QTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQ---KDMH 123

  Fly   188 DKTPYTIMFGPDKCG-NDVKMHFIFRHVNPINGTITEKHCNKPKN-------RLEEPFKDKLPHL 244
            ..:.|.||||||.|| ...|:|.||.:              |.||       |.::   |:..||
Mouse   124 GDSEYNIMFGPDICGPGTKKVHVIFNY--------------KGKNVLINKDIRCKD---DEFTHL 171

  Fly   245 YQLVVRPDNSFEIRVDHKIINEGSLLTDFKPPVNPPAEIDDPNDHKPESWDEREKIPDPTAHKPE 309
            |.|:|||||::|:::|:..:..|||..|:  ...||.:|.||:..|||.||||.||.|||..|||
Mouse   172 YTLIVRPDNTYEVKIDNSQVESGSLEDDW--DFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPE 234

  Fly   310 DWDEDAPPQLPDTDAVMPNGWLEDEPDMIFDPTATKPEDWDAEIDGEWEAPLVDNPVCEKAPGCG 374
            ||                     |:|:.|.||.|.||||||.|:|||||                
Mouse   235 DW---------------------DKPEHIPDPDAKKPEDWDEEMDGEWE---------------- 262

  Fly   375 KWKAPLIPNPNYKGKWRAPMIENPNYQGKWAPRKIPNPDFFEDLKPFQMTPISAVGLELWSMSSD 439
               .|:|.||.|||:|:...|:||:|:|.|...:|.||::..|...:.....:.:||:||.:.|.
Mouse   263 ---PPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSG 324

  Fly   440 ILFDNLIITDDVEVARDFAANSFDIKRRYIDRESDSFVNKVVELAKANPSIWGIGLVAIVALVAL 504
            .:|||.:||:|...|.:|...:                             ||:           
Mouse   325 TIFDNFLITNDEAYAEEFGNET-----------------------------WGV----------- 349

  Fly   505 TIYCRFGTAKSQDSAAKKAAAEAKKSDDPQPDDEPEAEEESDERAAGDTSKESTPLSASPKKNQK 569
                    .|:.:...|....|.::..:.:.|.:.:.|||::::...|...|.            
Mouse   350 --------TKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDDDRDED------------ 394

  Fly   570 SDLDDNEEESKAAESREPAQTEE 592
               :|.|:|.:..|...|.|.::
Mouse   395 ---EDEEDEKEEDEEESPGQAKD 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cnx99ANP_477157.1 Calreticulin 74..447 CDD:459737 133/382 (35%)
CalrNP_031617.1 N-domain 18..197 67/215 (31%)
Calreticulin 23..332 CDD:459737 133/382 (35%)
4 X approximate repeats 191..255 37/86 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..277 52/125 (42%)
P-domain 198..308 59/151 (39%)
Interaction with PPIB. /evidence=ECO:0000269|PubMed:20801878 237..270 21/51 (41%)
3 X approximate repeats 259..297 19/56 (34%)
C-domain 309..416 30/169 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..416 15/80 (19%)
Prevents secretion from ER 413..416 0/2 (0%)

Return to query results.
Submit another query.