DRSC/TRiP Functional Genomics Resources

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Protein Alignment cutlet and Gnf1

DIOPT Version :10

Sequence 1:NP_787969.1 Gene:cutlet / 44637 FlyBaseID:FBgn0015376 Length:993 Species:Drosophila melanogaster
Sequence 2:NP_001014605.1 Gene:Gnf1 / 40607 FlyBaseID:FBgn0004913 Length:1008 Species:Drosophila melanogaster


Alignment Length:1126 Identity:219/1126 - (19%)
Similarity:362/1126 - (32%) Gaps:407/1126 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ENEEFE--LQYQDELELLEDLPDEFNAYDGPSTSKQAAEKQKENRAPVAALRDSTRLGNSTLGSP 69
            |||:.:  |...|..|.:::...|...:.  .|....:.|:.:|.:|......||:   |...:|
  Fly   121 ENEDIDRSLMEVDLDESIKEAAPEKKVHS--ITRSSPSPKRAKNSSPEPPKPKSTK---SKATTP 180

  Fly    70 QLSQ----ITFGASQLGGEEEAEGTSSGGQVNRRLFG-----------TPKGPPVGRGC--STPF 117
            ::.:    ....:|.|..||..|...:...:.::...           .|||.|   .|  ...|
  Fly   181 RVKKEKPAADLESSVLTDEERHERKRASAVLYQKYKNRSSCLNPGSKEIPKGSP---DCLSGLTF 242

  Fly   118 QRMPAIQELENTQLTS--RSYGLEKENAAANQL------QEVGLK------NVNKRRLERDLFGD 168
            .....::.:|..:..|  :.||.:.......:|      :|.|.|      .:|...|..|  |.
  Fly   243 VVTGVLESMEREEAESVIKEYGGKVMTVVGKKLKYLVVGEEAGPKKLAVAEELNIPILSED--GL 305

  Fly   169 IDDLFHESYEDPMVKKARTEEQRDHEAIER-ILELRRKMRESSKTLRKDDVSRLK--ALHDFKMR 230
            .|.:..:|.....||:.:...:::|.:.|: ..|::...|.|.|  ::.:.::||  ..||....
  Fly   306 FDLIREKSGIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDK--KEKEATKLKYGEKHDIAKH 368

  Fly   231 NLSYEIPNWPFLAIQRSDLERIYVRFHSEDYEQRQLDLISARGEVVGSLLGEAKDKIWQEAGEIV 295
            .:..|                     |:..                    .|.|||:        
  Fly   369 KVKEE---------------------HTSP--------------------KETKDKL-------- 384

  Fly   296 LSRATAAEDADVTLVNSNANSEP---------------------GRLWVDKYKPRKYIDLL---- 335
                     .||..|......||                     |..||||:||....:::    
  Fly   385 ---------NDVPAVTLKVKKEPSSQKEHPPSPRTADLKTLDVVGMAWVDKHKPTSIKEIVGQAG 440

  Fly   336 -SDEMTNRS--------------------LLYWLKMWDKVVFGKAFHSKREQEAVTGEGGTAGGA 379
             :..:||.:                    |:.||..|                .|..:|      
  Fly   441 AASNVTNHNLKLKAKQERVKVLHYFNFPRLMNWLSKW----------------YVNHDG------ 483

  Fly   380 ANQLNSFNKRTGKFESNGGWRQRKSRQALNTNVDALGRPMQKVALLCGPPGLGKTTLAHTIARHA 444
                   ||:.          ||.:..|.|.:     ....|.|||.||||:||||.|..:.:..
  Fly   484 -------NKKP----------QRPNPWAKNDD-----GSFYKAALLSGPPGIGKTTTATLVVKEL 526

  Fly   445 GYNVREINASDDRSPEAFKLALENGTQMSSVLNED-------------KRPNCIVLDEIDG---- 492
            |::..|.||||.||....|      .::|::|:..             .|.:.:::||:||    
  Fly   527 GFDAVEFNASDTRSKRLLK------DEVSTLLSNKSLSGYFTGQGQAVSRKHVLIMDEVDGMAGN 585

  Fly   493 APRQSIDYLVKFISDAVYTKVKAKGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPID 557
            ..|..:..|:..|.|:                 ..||||:|||...|.:|.|....:.:.|....
  Fly   586 EDRGGMQELIALIKDS-----------------SIPIICMCNDRNHPKIRSLVNYCYDLRFQRPR 633

  Fly   558 AARLAERLVKIAFKEQLKTDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQ- 621
            ..::..:::.|.|||::|.....:..:...:.||:|..|:.:...:|::.:       :...|| 
  Fly   634 LEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAKEDA-------SQKSGQQ 691

  Fly   622 ---KDRHQGLFAVWDAIFRIQRPRKTLHTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHSS---- 679
               ||...|   .|:.:      ||....|.:|                         |.|    
  Fly   692 VATKDLKLG---PWEVV------RKVFTADEHK-------------------------HMSFADK 722

  Fly   680 -----GDYERLTQGVYENYLQQKMPDPN-------FTGVCEALKWFCFTDTVQHQISRQQNYSVY 732
                 .||......|.:||| |.:|..|       .....:||.   ..|.|:.:|....     
  Fly   723 SDLFFHDYSLAPLFVQQNYL-QVLPQGNKKDVLAKVAATADALS---LGDLVEKRIRANS----- 778

  Fly   733 PYLQYGFVAWHLL----FATLAWP----------KIAFPTRGF-EFQQKSTNQRNIFQAL--CKG 780
                    ||.||    |.:...|          :|.||  |: ....||..:..:.|.|  ...
  Fly   779 --------AWSLLPTQAFFSSVLPGEHMCGHFTGQINFP--GWLGKNSKSGKRARLAQELHDHTR 833

  Fly   781 VTTSALGVGQGGTLLLDTVP-LLKRILSPQLRSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVK 844
            |.||    |...::.||..| ||..|:.|         |:...|:.:...::||.|..|      
  Fly   834 VCTS----GSRLSVRLDYAPFLLDNIVRP---------LAKDGQEGVPAALDVMKDYHL------ 879

  Fly   845 SQEGHYVFQTEPDLDALSAFPGYTGLSLPY--------------FSRQLIAREVDLERIRRAAPK 895
                     ...|||:|.....:.|...|.              ::::::|.....:        
  Fly   880 ---------LREDLDSLVELTSWPGKKSPLDAVDGRVKAALTRSYNKEVMAYSYSAQ-------- 927

  Fly   896 GGAPSAPAAKKKTSGAAAQ-------------LPNHLQTLKPKP---ISASNMHSAPKQQLTKDF 944
                 |...|||:..|.|.             ...||.:.:.:.   :...::..|.|:..|...
  Fly   928 -----AGIKKKKSEAAGADDDYLDEGPGEEDGAGGHLSSEEDEDKDNLELDSLIKAKKRTTTSKA 987

  Fly   945 FGRITHKSTSTNSAEESKTDA 965
            .|  ..|..::::|.:||..|
  Fly   988 SG--GSKKATSSTASKSKAKA 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cutletNP_787969.1 PRK04195 416..>645 CDD:235250 62/249 (25%)
Gnf1NP_001014605.1 PTZ00121 <12..434 CDD:173412 70/382 (18%)
BRCT_RFC1 232..310 CDD:349383 17/82 (21%)
PRK04195 421..969 CDD:235250 146/715 (20%)
RFC1 764..917 CDD:462507 41/198 (21%)

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