DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and ATXR2

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_188819.2 Gene:ATXR2 / 821736 AraportID:AT3G21820 Length:473 Species:Arabidopsis thaliana


Alignment Length:324 Identity:69/324 - (21%)
Similarity:96/324 - (29%) Gaps:130/324 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 LKC-SNCRYVSYCHRSCQMQAW-GQHKHEC--------------PFLKKVHPRVVPD----AARM 114
            |.| ..|:...||..||....| ..|...|              .|:|  |.....|    ||:.
plant   174 LSCPGGCQEAFYCSESCAAADWESSHSLLCTGERSESISREALGEFIK--HANDTNDIFLLAAKA 236

  Fly   115 LCRLILRLEHGGDLIRGYYTEHGSRKFR------------------------------------- 142
            :...|||       .|....||..:|.:                                     
plant   237 IAFTILR-------YRKLKAEHVDKKAKQSEPKQSLLLEAWKPVSIGYKRRWWDCIALPDDVDPT 294

  Fly   143 DLMSHYAEIKNDPMRLEHLDSLHAVLTDMMAESPSTVPNKTELMSIYGRLI----TNGFNIL--- 200
            |..:...:|||  :....|:.|...:.|...|:..:       :.|||.:|    .|..:::   
plant   295 DEGAFRMQIKN--LACTSLELLKIAIFDKECEALFS-------LEIYGNIIGMFELNNLDLVVAS 350

  Fly   201 -------------DAEMNSI--------------------ATAIYLGVSITDHSCQPNAVATFEG 232
                         |||....                    .||.:...|..:|||.|||.| |:.
plant   351 PVEDYFLYIDDLPDAEKEETEEITRPFLDALGDEYSDCCQGTAFFPLQSCMNHSCCPNAKA-FKR 414

  Fly   233 NE--------LHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCTDAKES 288
            .|        :.:..|...|     ::.||||| ...|.:.|..|...|.|.|.||||.:...|
plant   415 EEDRDGQAVIIALRRISKNE-----EVTISYID-EELPYKERQALLADYGFSCKCSKCLEDSSS 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 68/318 (21%)
zf-MYND 60..97 CDD:460312 9/28 (32%)
TPR_12 <383..441 CDD:315987
ATXR2NP_188819.2 zf-MYND <173..203 CDD:460312 9/28 (32%)
SET_SMYD <380..466 CDD:380997 27/92 (29%)
Blue background indicates that the domain is not in the aligned region.

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