DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SMYD2

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:479 Identity:115/479 - (24%)
Similarity:212/479 - (44%) Gaps:89/479 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CS-SKSKNLKNPAPQIKRGQRILTEKPFAFVLKSQYRLERCDNCLEATKVL-KCSNCRYVSYCHR 83
            || .|.:.|:...| .:.|..:.:...:|:||....|...|:.|....:.| ||..|:...||:.
Human    13 CSPGKGRGLRALQP-FQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKEGLSKCGRCKQAFYCNV 76

  Fly    84 SCQMQAWGQHKHEC-PFL---------------------KKVHPRVVPDAARMLCRLILRLEHGG 126
            .||.:.|..||.|| |.:                     :|:||...| :.::|.  :...|...
Human    77 ECQKEDWPMHKLECSPMVVFGENWNPSETVRLTARILAKQKIHPERTP-SEKLLA--VKEFESHL 138

  Fly   127 DLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEHLDSLHAVLTDMMAESPSTVPNKTELMSIYGR 191
            |.:        ..:.:||      |::|...|.|..|.|.           ..|:...|:.::.:
Human   139 DKL--------DNEKKDL------IQSDIAALHHFYSKHL-----------GFPDNDSLVVLFAQ 178

  Fly   192 LITNGFNILDAEMNSIATAIYLGVSITDHSCQPNAVATFEGNELHVHAIEDMECLDWSKIFISYI 256
            :..|||.|.|.|::.:.:||:..|::.:|||.||.:.|::|....|.|:::::  ...::|.|||
Human   179 VNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIK--PGEEVFTSYI 241

  Fly   257 DLLNTPEQRRLDLKEHYYFLCVCSKCTDAKESKEMLAALCPNRNCGAGISVDRNNCPRCDAGISP 321
            |||...|.|...|::.|:|.|.|.:||...:.|             |.:.:.:.:.|       |
Human   242 DLLYPTEDRNDRLRDSYFFTCECQECTTKDKDK-------------AKVEIRKLSDP-------P 286

  Fly   322 KLRNAFNEAMTLTRHNLENMKDVAY-------LDVCKVCLDKQTGVFHPLNVWYVKTLDAAFEAA 379
            | ..|..:.:...|:.:|..:...:       |::|::..:|.:.||...||:.:..:..|....
Human   287 K-AEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVC 350

  Fly   380 IEVGKWSDALDYGQRLLPGFRKYHGPWNPLLGLLHMKLGKIQLYEGHSKEALHHLEEAQRILTVT 444
            :.:..|..||.|||:::..:.|::..::..:..:.:|||::.:...|.......|::|..|:.|.
Human   351 LYMQDWEGALQYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEHKAAGEKALKKAIAIMEVA 415

  Fly   445 HGRDHRLLTEQLYMLVLQARQEAH 468
            ||:||..::|      ::...|:|
Human   416 HGKDHPYISE------IKQEIESH 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 71/272 (26%)
zf-MYND 60..97 CDD:460312 13/37 (35%)
TPR_12 <383..441 CDD:315987 13/57 (23%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 76/286 (27%)
zf-MYND 52..90 CDD:460312 13/37 (35%)

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