DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and LOC4578189

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_001238168.2 Gene:LOC4578189 / 4578189 VectorBaseID:AGAMI1_000965 Length:680 Species:Anopheles gambiae


Alignment Length:439 Identity:93/439 - (21%)
Similarity:155/439 - (35%) Gaps:129/439 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IKRGQRILTEKPFAFVLKSQYRLERCDNCLEATKVLK-CSNCRYVSYCHRSCQMQAW-GQHKHEC 97
            ::..|.||.|||.|..|..:|....|.:|.|..:||. |.:|..|.:|...|:.... ..|::||
Mosquito   276 LRPNQLILREKPHAAALLQEYSGTHCSDCFERIEVLYCCPHCVDVVFCSERCERNGCESYHRYEC 340

  Fly    98 PFLKKVHPRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEHLD 162
            .||..:.    ...|.::..|.||:          .|:..       .:::.||:::      |.
Mosquito   341 GFLGTLW----ASGATIVSLLALRI----------ITQKP-------CAYFEEIRHE------LP 378

  Fly   163 SLHAVLTDMMAESP-------------------------STVPNKTELMSIY----------GRL 192
            .|.|.:||.:.:..                         :|:.|....|:.|          |.|
Mosquito   379 ELSASMTDKLPDDDYRKIFNLVTHSDKRTPEDNLVWTLMATMLNTVLRMANYSAAGEENNFLGYL 443

  Fly   193 ITNGFNILDAEMN-----------------SIATAIYLGVSITDHSCQPNAVATFEGNELHVHAI 240
            :.:...:::...:                 ::..|:|..:::.:|||.|..|..|.|..:||..|
Mosquito   444 LLHNLQVVNYNAHDVSEVQRKHANEPALSVAVGAALYPLLALFNHSCDPGIVRYFTGTTVHVRTI 508

  Fly   241 EDMECLDWSKIFISYIDLLN--TPEQRRLDLKEHYYFLCVCSKCTDAKESKEMLAA---LCPNRN 300
            :::..  .:.|..:|..|..  ...:||..|..:|.|.|.|..|          ||   .|.|.|
Mosquito   509 KNIAA--GALIAENYGPLYTRMARSERRQSLATNYKFECGCEAC----------AADWPTCANMN 561

  Fly   301 CGAGISVDRNNCPRCDAGISPKLRNAFNEAMTLTRHNLENMKDVAYLDVCKVCLDKQTGVFHPLN 365
                .:|.|..|...||...|.|            ::|.:.........|...:|    |...:.
Mosquito   562 ----HAVIRFRCTGPDACHRPVL------------YDLHSSSQGVRCGACGHIVD----VGERIR 606

  Fly   366 VWYVKTLDAAFEAA---IEVGKWSDAL-DYG-------QRLLPGFRKYH 403
            :.....:.:.|..|   .:||.:..|| .|.       :.|:|.:|.||
Mosquito   607 ILREANMISRFNEANHLYQVGMYEQALAKYAAIMLIMDEVLVPPYRDYH 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 65/304 (21%)
zf-MYND 60..97 CDD:460312 11/38 (29%)
TPR_12 <383..441 CDD:315987 9/29 (31%)
LOC4578189XP_001238168.2 None

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