DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and smyd5

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001004614.2 Gene:smyd5 / 447875 ZFINID:ZDB-GENE-040912-39 Length:415 Species:Danio rerio


Alignment Length:393 Identity:90/393 - (22%)
Similarity:132/393 - (33%) Gaps:134/393 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SATASAC-------SSKSKNL--KNPAPQIKRGQRILTEKPFA---FVLKSQYRLERCDNCLEAT 67
            ||.||.|       :.|.|.|  |.|   .|:|..|..|:|..   |:..:.|:...|:.||.|.
Zfish    15 SAKASNCVDVRFINNVKGKGLFAKKP---FKKGDTIFIERPLVSSQFLWNALYKYRACEYCLRAL 76

  Fly    68 KVLK-----------------------------CSNCRYVSYCHRSCQMQAWGQ-HKHEC----- 97
            :..:                             |..|: |.||...|:..|..| ||..|     
Zfish    77 ETAEENARRLSGLPALILPHPELCKVRPDRHQACPQCQ-VMYCSSECRQAAMDQYHKILCLGPSN 140

  Fly    98 -----PFLK------KVHPRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEI 151
                 |..|      .||......:..:|.:::..::...|      .|...|.|.:..|..|  
Zfish   141 DDPDHPVNKLQDAWRSVHFPPETSSVMILAKMVATIKQTQD------KERWQRLFTNFCSRTA-- 197

  Fly   152 KNDPMRLEH----------LDSLHAVLTDMMAESP----STVPNKTELMSIYGRLITNGFNI--- 199
             |:...:.|          |..|..:.|..:.|..    .|......|.|:.|   |||..|   
Zfish   198 -NEEEEIVHKLLGEKFQGQLGLLRNLFTTALYEDRLSQWFTPEGFRSLFSLVG---TNGQGIGTS 258

  Fly   200 --------------------------------LDAE----MNSIATAIYLGVSITDHSCQPNAVA 228
                                            :|.|    :|...:.::|..|..:|||.|||.|
Zfish   259 SLSQWVHACDALELPRQQREQLDAFIDQLYKDIDKETGDFLNCEGSGLFLLQSSCNHSCVPNAEA 323

  Fly   229 TFEGNE--LHVHAIEDMECLDWSKIFISYIDLL---NTPEQRRLDLKEHYYFLCVCSKCTDAKES 288
            :|..|.  ||:.|:.|:.  ...:|.|||:|..   .:...|...|:|:|.|:|.|.||....:.
Zfish   324 SFPENNFLLHLTALGDIG--PGEEICISYLDCCQRDRSRHSRHKILRENYLFICSCQKCLSQMDD 386

  Fly   289 KEM 291
            .:|
Zfish   387 ADM 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 79/356 (22%)
zf-MYND 60..97 CDD:460312 14/66 (21%)
TPR_12 <383..441 CDD:315987
smyd5NP_001004614.2 SET_SMYD5 21..383 CDD:380919 85/379 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..415 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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