DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and LOC3291442

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_061508966.1 Gene:LOC3291442 / 3291442 VectorBaseID:AGAMI1_005176 Length:453 Species:Anopheles gambiae


Alignment Length:265 Identity:64/265 - (24%)
Similarity:103/265 - (38%) Gaps:69/265 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GSSRSATTSATASACSSKS--------KNLKNPAPQIKRGQRILTEKPFAFVLKSQYRLERCDNC 63
            ||..:|..:|....||.|:        :.::... .::.|.::|.||||..||:::...:|||.|
Mosquito   154 GSCAAAKPNAPTRHCSIKACLEVGEDGEGIRTNR-SLEDGAKVLVEKPFVLVLEAELAYQRCDFC 217

  Fly    64 LEAT---KVLKCSNCRYVSYCHRSCQMQAWGQ-HKHECPFLKKVHPRVVPDAARMLCR------- 117
             .||   .:..|:.|..|.||...||.|::.: |:.||.         :.|..::|.|       
Mosquito   218 -GATNEHNLRPCTGCTGVMYCSEECQEQSYQRYHQFECE---------IVDDLQLLFRGPKPTRM 272

  Fly   118 -----------LILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEHLD-SLHAVLTD 170
                       ::|.||.....:|...|.....::|           ||..||..| .||     
Mosquito   273 FHVVLRLFWHAVLLFLEDPEAFLRRVETPAELEQYR-----------DPFALEPTDYVLH----- 321

  Fly   171 MMAESPSTVPNKTELMSIYGRLITNGFNILDAEMNSIATAIYLGVSITDHSCQPNAVATFEGNEL 235
            ::|......||..:...:.||.:|....||     ..|.|:...||:.      :.:...||:|.
Mosquito   322 LLAIYKDREPNPEDSKDMTGRCVTQFMAIL-----MYAIAVKENVSLW------SRLQAVEGSEK 375

  Fly   236 HVHAI 240
            ..|.:
Mosquito   376 LPHLL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 57/230 (25%)
zf-MYND 60..97 CDD:460312 14/40 (35%)
TPR_12 <383..441 CDD:315987
LOC3291442XP_061508966.1 None
Blue background indicates that the domain is not in the aligned region.

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