DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SmydA-8

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_566389.3 Gene:SmydA-8 / 3289599 VectorBaseID:AGAMI1_001522 Length:522 Species:Anopheles gambiae


Alignment Length:305 Identity:73/305 - (23%)
Similarity:113/305 - (37%) Gaps:63/305 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SQYRLERCDNCLEATKVLKCSNCRYVSYCHRSCQMQ----------AWGQHKHECPFLKKVHPRV 107
            :.|.:..|.:|        ||..|.:..|...|::.          |...|..||..::...|: 
Mosquito    99 NNYEVIFCASC--------CSILRRLQLCTGGCRLPICSRCDYSVGASSPHAAECALIQSWQPK- 154

  Fly   108 VPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEHLDSLHAVLTD-- 170
              ||.|....::..|..    |||:......|      |...:::..|.|.|....:..:|.|  
Mosquito   155 --DAGRYSKNILYALTS----IRGFLLSERDR------SIVLQMEGHPPRKEMTTEIERLLKDGY 207

  Fly   171 ---MMAESPSTVPNKTELMSIYGRLITNGFN----ILDAEMNS---IATAIYLGVSITDHSCQPN 225
               :..|.|:.    ..|..:...|.||.|.    :.|.|.|.   |...:|:..::.:|.|:||
Mosquito   208 FWNLDGEGPAV----RYLRQVVNILNTNAFETSRIVADEENNQHEIILRGLYILGALMNHCCRPN 268

  Fly   226 AVATFEGN-ELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCTDAKESK 289
            ....|:|. .:.|||...::  ...:|..:|..:|...:.|.:.|.....|||.|.:|.|..|..
Mosquito   269 VRYVFDGELRMRVHASRPIK--KGEQIMNNYSKILWGSQHRIIHLCFSKNFLCCCDRCKDPTEFG 331

  Fly   290 EMLAAL-CPNRNCGAGISVDRN--------NCPRCDAGISPKLRN 325
            ..|.|| |...:|..|..:..|        .|.||    |.|:.|
Mosquito   332 TYLGALKCVRESCPEGRLLPVNPLKISSVWRCDRC----SLKMDN 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 58/253 (23%)
zf-MYND 60..97 CDD:460312 9/46 (20%)
TPR_12 <383..441 CDD:315987
SmydA-8XP_566389.3 SET_SMYD <242..324 CDD:380997 22/83 (27%)
Blue background indicates that the domain is not in the aligned region.

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