DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SmydA-8

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster


Alignment Length:430 Identity:92/430 - (21%)
Similarity:152/430 - (35%) Gaps:103/430 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IKRGQRILTEKPFAFVLKSQYRLERCDNCLEATKVLKCSN--CRY---VSYCHRSCQMQAWGQHK 94
            |..|:.|..|:  |.|.....|..:..:|:...:.|..:.  ||:   :..|......:   :|:
  Fly    75 IAAGELIFQER--ALVTGPTARKGQLSSCICCHETLPQTGFLCRHRCTLPVCETCSDSE---EHQ 134

  Fly    95 HECPFLKKVHPRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAE--------- 150
            .||...::..|:.|......:..:.||:.   ..:|.::.....|...|.|...||         
  Fly   135 AECEHFRRWQPKDVDAEQEQVNPMSLRIL---TAVRVFHLGKEQRHLVDAMQANAERAYRREIIQ 196

  Fly   151 ----IKNDPMRLEHLDSLHAVLTDMMAESPSTVPNKTELMSIYGRLITNGFNILDAEMNS----- 206
                .:|.|       :...|..|             :|..|.|.|.||.|   :|...|     
  Fly   197 AAQCFRNFP-------TTDRVFMD-------------QLFRIVGVLNTNAF---EAPCRSGGHET 238

  Fly   207 IATAIYLGVSITDHSCQPNAVATFEGNELH-VHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLK 270
            :...::...:|.:|.|.|||...||...|. |.|..|:.  ...:|..:|..:|.....|.:.||
  Fly   239 LLRGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIP--KGGEITTTYTKILWGNLTRNIFLK 301

  Fly   271 EHYYFLCVCSKCTDAKESKEMLAAL-CPNRNC-GAGISVDRN------NCPRCDAGISPKLRNAF 327
            ...:|.|.|.:|.|..|:...|:|| |..:.| |..|.|...      .|..|: .:.|..:.|.
  Fly   302 MTKHFACDCVRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCE-NVFPHAKMAK 365

  Fly   328 NEAMTL----TRHNLENMKDVAYL--DVCK--------VCLDKQTGVFHPLNVWYVKTLDAAFEA 378
            .:...|    .|.|..:::|:.:.  ::|.        |.::.:..|     :|.:...|.....
  Fly   366 YQDFALNTINNRINSCSVQDMIHFINELCPRFCPSSNYVLIEAKLNV-----IWRMTRFDHEEYT 425

  Fly   379 AIEVGKWSDALDYGQRLLPGFRKYHGPWNPLLGLLHMKLG 418
            ..|:|...              :|.   ..:|.:|| |||
  Fly   426 PEEMGHMD--------------RYR---EEVLAILH-KLG 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 60/272 (22%)
zf-MYND 60..97 CDD:460312 6/41 (15%)
TPR_12 <383..441 CDD:315987 8/36 (22%)
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 5/14 (36%)
SET_SMYD <224..313 CDD:380997 26/93 (28%)

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