DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SMYD1

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_938015.1 Gene:SMYD1 / 150572 HGNCID:20986 Length:490 Species:Homo sapiens


Alignment Length:456 Identity:112/456 - (24%)
Similarity:198/456 - (43%) Gaps:71/456 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ILTEKPFAFVLKSQYRLERCDNCLE-ATKVLKCSNCRYVSYCHRSCQMQAWGQHKHECPFLKKVH 104
            |..|:.::.|:........|..|.: ..|:.:|..|::..||.|:||..||..||:||..:|: :
Human    33 IFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKR-Y 96

  Fly   105 PRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDL---MSHYAEIKNDPMRLEHLDSLHA 166
            .:|..:..|:..|::.|:|..|..:    ||.......||   :.|:.|.:...:|::       
Human    97 GKVPNENIRLAARIMWRVEREGTGL----TEGCLVSVDDLQNHVEHFGEEEQKDLRVD------- 150

  Fly   167 VLTDMMAESPSTVPNKTELMS-IYGRLITNGFNILDAE-MNSIATAIYLGVSITDHSCQPNAVAT 229
            |.|.:....|.:.....:.:| |:|.:..|||.:.|.. :.::...|:..:.:.:|.|.||....
Human   151 VDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVI 215

  Fly   230 F-EGNE------LHVHAIEDMECL----DWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKC- 282
            | .||.      .|.....::..|    :..::.:||||.||..|:|:..||:.|||.|.|..| 
Human   216 FNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQ 280

  Fly   283 ------------TDAKESKEMLAALCPNRNCGAGISVDRNNCPRCDAGISPKLRNAFNEAMTLTR 335
                        .:.|.|:|::..:         |...::...:.|...|..|   ::|.:.|  
Human   281 KKLKDDLFLGVKDNPKPSQEVVKEM---------IQFSKDTLEKIDKARSEGL---YHEVVKL-- 331

  Fly   336 HNLENMKDVAYLDVCKVCLDKQTGVFHPLNVWYVKTLDAAFEAAIEVGKWSDALDYGQRLLPGFR 400
                          |:.||:||..||...|::.::.|....|....:..:.:|..|.:|::.|:.
Human   332 --------------CRECLEKQEPVFADTNIYMLRMLSIVSEVLSYLQAFEEASFYARRMVDGYM 382

  Fly   401 KYHGPWNPLLGLLHMKLGKIQLYEGHSKEALHHLEEAQRILTVTHGRDHRLLTEQLYMLVLQARQ 465
            |.:.|.|..||:..|:.|....:.|:.:.....:.:|..||.||||..|. :|:.|..:.:|...
Human   383 KLYHPNNAQLGMAVMRAGLTNWHAGNIEVGHGMICKAYAILLVTHGPSHP-ITKDLEAMRVQTEM 446

  Fly   466 E 466
            |
Human   447 E 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 69/272 (25%)
zf-MYND 60..97 CDD:460312 14/37 (38%)
TPR_12 <383..441 CDD:315987 13/57 (23%)
SMYD1NP_938015.1 SET_SMYD1 7..281 CDD:380924 69/259 (27%)
zf-MYND 52..90 CDD:460312 14/37 (38%)

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