DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and LOC1274967

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_001688544.2 Gene:LOC1274967 / 1274967 VectorBaseID:AGAMI1_006910 Length:638 Species:Anopheles gambiae


Alignment Length:332 Identity:71/332 - (21%)
Similarity:117/332 - (35%) Gaps:103/332 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IKRGQRILTEKPFAFVLKSQYRLERCDNC--LEATKVLKCSNCRYVSYCHRSCQMQAWGQ-HKHE 96
            :|.|..:|.|||:|.:|..:.|.:||..|  .:...::.|..|....||...|..:|:.| |::|
Mosquito   227 LKAGDVLLIEKPYASMLNDKERYKRCAFCHNEDTFTLIPCEGCTLTMYCSDECMDKAYRQYHRYE 291

  Fly    97 CPFLK---KVHPRVVPD--AARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPM 156
            |..|:   ::..|:|..  ..||:...|...|..   :.| :..|.:......::.:....|...
Mosquito   292 CGVLRDCWRIAGRLVGGIVGLRMVATAIASFEQD---LEG-WVNHLNALDETKVNAFTVDWNKVT 352

  Fly   157 RLEHLDSLHAVLTDMMAES-------------------------PSTVPNKTELMSIYGRLITN- 195
            ..:..|::|.:.|:....|                         |...|:.|....::..|:.: 
Mosquito   353 DSDIYDTVHVLATNQKRRSREDLAVLMFFTSIVHRLLLERTDLGPFCEPSPTRSKLLFDLLLRHW 417

  Fly   196 -------------------------------GFNILDAEMNS---IATAIYLGVSITDHSCQPNA 226
                                           |::..|.|..|   .|.|:|...|:.:|||.||.
Mosquito   418 QTSLINKKQVYHVQRSEGQDEEDEYYEYNYAGYDSDDEEEYSDEMHAIAVYPLFSMVNHSCIPNV 482

  Fly   227 ------------VAT---FEGNEL-HVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYF 275
                        |||   ..|.:| .|:|...|   |:.:.|            |...|::.|||
Mosquito   483 APIHLLDGRCAFVATRPIAAGEQLFDVYAFASM---DFDRSF------------RIFCLRKSYYF 532

  Fly   276 LCVCSKC 282
            .|.|:.|
Mosquito   533 KCRCAVC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 71/332 (21%)
zf-MYND 60..97 CDD:460312 10/39 (26%)
TPR_12 <383..441 CDD:315987
LOC1274967XP_001688544.2 None
Blue background indicates that the domain is not in the aligned region.

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