DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and LOC1272665

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_559081.4 Gene:LOC1272665 / 1272665 VectorBaseID:AGAMI1_004335 Length:511 Species:Anopheles gambiae


Alignment Length:519 Identity:118/519 - (22%)
Similarity:199/519 - (38%) Gaps:142/519 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IKRGQRILTEKPFAFVLKSQYRLE-RCDNCL-EATKVLKCSNCRYVSYCHRSCQMQAWGQHKH-- 95
            ||.|:.||.|.|  .|:...:..: .|..|| .|::.  |..|.....| |.|.       :|  
Mosquito    27 IKPGELILAEDP--IVVGPYWDADISCLGCLGPASRT--CRVCLKGPLC-RDCS-------RHDP 79

  Fly    96 -ECPFLK---KVHPRVVPDAARML----CRLILRLEHGGDLIRGYYTEHGSRKFRDLM---SHYA 149
             ||.|.:   |::...:.|...::    |.|:.|.:..              |:.::|   ||: 
Mosquito    80 VECSFYEQASKLNKNFLFDHFNIITPLRCLLLYRSDRD--------------KYNEMMAMESHF- 129

  Fly   150 EIKNDPMRLEHLDSLHAVLTDMMAE------SPSTVPNKTELMSIYGRLITNGFNI---LDA--- 202
            |.:.| ..:.|:.:.: |:..|:.|      ...||..:. |..|.|.|..|.|.|   :|:   
Mosquito   130 ESRRD-TEIWHIHNQY-VVEPMLNEKDFQQIDDLTVTGEL-LQRICGILDVNTFEIRGNMDSQGV 191

  Fly   203 EMNSIATAIYLGVSITDHSCQPNAVATFEG-NELHVHA---IEDMECLDWSKIFISYIDLLNTPE 263
            :||::|..:|...|:..|:||.|.:...:| ::|.:::   |:..|.|     :.:|..:|.:..
Mosquito   192 QMNNLARGLYPKTSLMTHNCQTNTLIAVDGMSKLRLYSSIGIKAGELL-----YYNYTRVLFSTF 251

  Fly   264 QRRLDLKEHYYFLCVCSKCTDAKESKEMLAALCPNRNCGAGISVDRNNCPRCDAGI------SPK 322
            :|:..|::..||:|.|::|:|..|....|::|               .|..||.|:      :||
Mosquito   252 ERQTHLRKGKYFICNCARCSDPTELGTHLSSL---------------KCTACDDGLCVFHTETPK 301

  Fly   323 LRNAFNEAMT----LTRHNLENMKDVAYLDVCKVCLD-----KQTGVF-HPLNVWYVKTLDAAFE 377
            .     |.:|    |.|..:..:...|..|:....||     |..|.. ..||..:...|:|...
Mosquito   302 W-----ECLTCGHQLPREYVNQIMCEARDDISSCALDSRNLEKVIGKHSKTLNPHHSLVLEAKQS 361

  Fly   378 AAIEVGKWSDALDYGQRLLPGFRKYHGPWNPLLGLLHM------KLGKIQLYEGH---------- 426
            .|.|:.....:.|.........::.......:|.:|.:      :|..|.|||.|          
Mosquito   362 LAGELRNMCMSYDIHNVPRQALKRKLELCEEMLQILRVLDPGVSRLTGIALYEYHAALVDLSRRN 426

  Fly   427 -------SKEALHHLEEAQRILTVTHGR---DHRLLTE-QL-------------YMLVLQARQE 466
                   :.|.|..|:.::..|....|.   :||...| ||             |:..:||.:|
Mosquito   427 HDIGEIKTPELLERLKLSEAALKEAIGMLVFEHRTTPEGQLTKKAMCELKELREYIQKVQAMEE 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 69/279 (25%)
zf-MYND 60..97 CDD:460312 10/40 (25%)
TPR_12 <383..441 CDD:315987 12/80 (15%)
LOC1272665XP_559081.4 None

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