DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SmydA-2

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_309220.6 Gene:SmydA-2 / 1270515 VectorBaseID:AGAMI1_014742 Length:519 Species:Anopheles gambiae


Alignment Length:502 Identity:103/502 - (20%)
Similarity:162/502 - (32%) Gaps:155/502 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CDNCLEATKVLKCSNCRYVSYCHRSCQMQAW-GQHKHECPFLKKV-------------------- 103
            |..| .|..:.:|:.|:.|.||.|..|...| .||:.:|...|.|                    
Mosquito     6 CRVC-SAPAMQRCAGCQQVGYCGRDHQRADWKAQHRDQCRRFKVVRNDRLGRHLVATRHIKQGEI 69

  Fly   104 ----HPRVV-PDAARM-LCRLILRLEHGGDLIRGYYTEHGSRKF---------------RDLMSH 147
                .|..| |..|.: ||     |....:|:.|:....|..:|               .::..|
Mosquito    70 IYRDEPYAVGPKIANVPLC-----LGCNRNLMAGWDATRGLDRFHECSRCGWPLCGPGCEEVAQH 129

  Fly   148 YAE------------IKNDPMRLEHLDSLHAVLT-------------------------DMMAES 175
            ..|            |:.:|...|..:|.:.|:.                         |....|
Mosquito   130 RPECSVLAGSGYRPNIRPNPSNPEQRESAYCVIVPLRVLLLERIAPERYATVQGFESHLDERLAS 194

  Fly   176 P-------STVP-----------NKTELMSIYGRLITNGFNILDAEMNSIATAIY-LGVSITDHS 221
            |       :.||           ::..::.:...|.||.:.|...|.:.....:| ||..:: |.
Mosquito   195 PLYGVLRSNLVPFLRQVLRLQQYSEQTVLKLSAILDTNCYEIRLPEQHVKVRGLYPLGAMLS-HD 258

  Fly   222 CQPNAVATFEGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCTDAK 286
            |:||....|: :.||:..:..::......|..||...|....||||.|::...|.|.|.:|.|..
Mosquito   259 CRPNTKHYFD-DRLHMVLVATVDIPAGGVIHASYTQPLLGTVQRRLALRQAKCFDCCCERCADPT 322

  Fly   287 ESKEMLAAL-CPN--RNCGAGISVDRNN------CP--RCDAGISPKLRNAFNEAMTLTRHNLEN 340
            |.....:.. |||  |.....::|:..|      |.  ||.....|....|..|.|......|:.
Mosquito   323 EYGTSASGFRCPNCRRTPSLVLAVEPTNYRTVWRCQNRRCAYQERPDQYVARCERMQQELLALDR 387

  Fly   341 MKDVAYLDVCKVCLDKQTGVFHPLNVWYVKT------------------LDAAFEAAIEVGKWSD 387
            .:...|.:.    |.:.....||.|.:.::.                  .:||....:|:.:  |
Mosquito   388 TEPAGYEEF----LARHATTLHPWNAYMLQAKYALTQLLGSARPAKAPPSEAAARRTVELCR--D 446

  Fly   388 ALDYGQRLLPGFRKYHGPWNPLLGLLHMKLGKIQLYEGHSKEALHHL 434
            .|...:||.||:..:.              .|:.|..|.:...||.|
Mosquito   447 LLAVAERLEPGYSTFR--------------AKLLLELGSALATLHAL 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 67/321 (21%)
zf-MYND 60..97 CDD:460312 13/37 (35%)
TPR_12 <383..441 CDD:315987 12/52 (23%)
SmydA-2XP_309220.6 None

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