DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SMYD5

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_006053.2 Gene:SMYD5 / 10322 HGNCID:16258 Length:418 Species:Homo sapiens


Alignment Length:402 Identity:97/402 - (24%)
Similarity:149/402 - (37%) Gaps:133/402 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VGSSRSATTSATASACSS-KSKNLKNPAPQ-IKRGQRILTEKPFA---FVLKSQYRLERCDNCLE 65
            ||.:..|..|......|| |.|.|.  |.| |::|:.|..|:|..   |:..:.||...||:||.
Human    13 VGVAGRARVSVEVRFVSSAKGKGLF--ATQLIRKGETIFVERPLVAAQFLWNALYRYRACDHCLR 75

  Fly    66 AT---------------KVL--------------KCSNCRYVSYCHRSCQMQAWGQ-HKHECPFL 100
            |.               :||              .|.:|: |.||...|::.|..| |:..||..
Human    76 ALEKAEENAQRLTGKPGQVLPHPELCTVRKDLHQNCPHCQ-VMYCSAECRLAATEQYHQVLCPGP 139

  Fly   101 KK---VHP-----------RVVPDAA--RMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYA 149
            .:   :||           ...|:.|  .::.|::..::...|      .:...|.|....:..|
Human   140 SQDDPLHPLNKLQEAWRSIHYPPETASIMLMARMVATVKQAKD------KDRWIRLFSQFCNKTA 198

  Fly   150 EIKNDPMRLEH----------LDSLHAVLTDMMAE---SPSTVPNKTELMSIYGRLITNGFNI-- 199
               |:...:.|          |:.|..:.|:.:.|   |....|:  ...|::..:.|||..|  
Human   199 ---NEEEEIVHKLLGDKFKGQLELLRRLFTEALYEEAVSQWFTPD--GFRSLFALVGTNGQGIGT 258

  Fly   200 ----------------------LDAEMNSI------ATAIYLGV---------SITDHSCQPNAV 227
                                  |||.::.:      ||..:|..         |..:|||.|||.
Human   259 SSLSQWVHACDTLELKPQDREQLDAFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAE 323

  Fly   228 ATFEGNE--LHVHAIEDMECLDWSKIFISYIDLL---NTPEQRRLDLKEHYYFLCVCSKC----- 282
            .:|..|.  |||.|:||::  ...:|.|||:|..   .:...|...|:|:|.|:|.|.||     
Human   324 TSFPENNFLLHVTALEDIK--PGEEICISYLDCCQRERSRHSRHKILRENYLFVCSCPKCLAEAD 386

  Fly   283 ----TDAKESKE 290
                |..:|.:|
Human   387 EPNVTSEEEEEE 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 84/365 (23%)
zf-MYND 60..97 CDD:460312 16/66 (24%)
TPR_12 <383..441 CDD:315987
SMYD5NP_006053.2 SET_SMYD5 22..384 CDD:380919 91/377 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..418 3/14 (21%)
Blue background indicates that the domain is not in the aligned region.

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