Protein Alignment: robo2 and Cont

• Sequence 1: NP_001259868.1
• Gene: robo2
• FlyBaseID: FBgn0002543
• Length: 1519
• Species: Drosophila melanogaster
• Sequence 2: NP_649461.2
• Gene: Cont
• FlyBaseID: FBgn0037240
• Length: 1390
• Species: Drosophila melanogaster
• Alignment Length: 1011
• Identity: 229/1012 (23%)
• Similarity: 369/1012 (36%)
• Gaps: 226/1012 (22%)

  Fly    91 PRIIEHPMDTT--VPKN---DPFTFNCQAEGNPTPTIQWFKDGRELKTD----------TGSHRI 140
            |..::.|.|||  |.||   :..|.:|.|.|.|||:..|:   ||:..|          ....|.
  Fly   362 PYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWY---REVYVDDRLEYQKIDPLAQDRY 423

  Fly   141 MLPAGGLFFLKVIHSRRES-DAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGE 204
            .:..|.|    :|:..::: |.|.|.|.|:|:||..||.:|.|...|:. ||.|:      ...|
  Fly   424 TISGGNL----IIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIM-EFNLK------RSAE 477

  Fly   205 VALME------CGAPRGSPEPQISWRKNGQTLNLVGNKRIRIVDGGNLAIQEARQSDDGRYQCVV 263
            .:.|.      |..|:..|:.:..|.::.....:..::|:.:...|.|........|...|.|.|
  Fly   478 TSEMNWGKSIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTV 542

  Fly   264 KNVVGTRESATAFLKVHVRP--------FLIRGPQ--NQTAVVGSSVVFQCRIGGDPLPDVLWRR 318
            :.:|........|..:.|.|        |....|:  .:..|.|..:..:|...|.|:|...|.|
  Fly   543 QTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWTR 607

  Fly   319 TASGGNMPLRR--VHVLEDRSLKLDDVTLEDMGEYTCEADNAVGGITATGILTVHAPPKFVIRPK 381
            .    .:||:|  ..:...|.|.:.:.|..|.|||:|...|....:..:..:.:...|:|.|..|
  Fly   608 Q----GLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLK 668

  Fly   382 NQLVEIGDEVLFECQANGHPRPTLYWSVEGNSSLLLPGYRDG-RMEVTLTPEGR-----SVLSIA 440
            :.:.:...:|.|.|:|...|.....|            |::. |::.......|     :||:|.
  Fly   669 DMIKDYNSDVTFICEAFAIPDANYTW------------YKNAERLDPANINRDRYIIQDNVLTIK 721

  Fly   441 RFAREDSGKVVTCNALNAVG---SVSSRTVVSVDTQFELPPPIIEQGPV---NQTLPVKSIVVLP 499
            ...::....:..|.|.|.:.   |.:...|:|:...|:..|...|...|   |.|        :.
  Fly   722 FLEKDKDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTT--------IV 778

  Fly   500 CRTLGTPVPQVSWYLDGIPIDVQEHERRNLSDAGALTISDLQRHEDEGLYTCVASNRNG-KSSWS 563
            |.....|.|:..|..||..|....|  |.:..:|.||||...| :|||:|||:|||:.| ..|.:
  Fly   779 CDPEAAPRPKFQWKKDGQVIGSGGH--RRILPSGTLTISPTSR-DDEGIYTCIASNQAGTDESHA 840

  Fly   564 GYLRLDTPTNPNIKFFRAPELSTYPGPPGKPQMVEKGENSVTLSWTRSNKVGGSSL-VGYVIEMF 627
            ..:.|.     .|:|...|           ||.:...|:.  |.:..........| :.||.:..
  Fly   841 RVIVLQ-----EIRFIETP-----------PQRIVSKEHD--LIFLHCEAAFDELLDIAYVWKHN 887

  Fly   628 G---KNETDG-------WVAVGTRVQNTTFTQTGLLPGVNYFFLIRA-----ENSHGLSLPSPMS 677
            |   ||..||       |..:  .|.||:....|     :|..::::     .:...:|:.....
  Fly   888 GEVLKNNHDGTGRIIVDWNRL--TVHNTSMRDAG-----DYECVVKSAVNEISSKTSVSIEGAPG 945

  Fly   678 EPITVGTRYFNSGLDLSEARASLLSGDVVELSNAS----------VVDSTSMKLTWQIINGKYVE 732
            .|..|..      :.:|:.:|      ::|..:.|          ::..|:...||..::
  Fly   946 APGGVQV------IQISKTKA------IIEWVDGSHNGRAIRYYNILGRTNWNRTWVNVS----- 993

  Fly   733 GFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSA------SASASASALIST---KPNIAAAGK 788
             .:|.||::........|.|.:.|.......|.:|      ...::.|.:.||   ||.||
  Fly   994 -THVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIA---- 1053

  Fly   789 RDGETNQSGGGAP--------TPL--------NTKYRMLTILNGG--------------GASSCT 823
               ..|..|||..        .||        ...|::...|.|.              |.:...
  Fly  1054 ---PRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVN 1115

  Fly   824 ITGLVQYTLYEFFIVPFYKSVEGKPSNSRIARTLEDVPSEAPYGMEALLLNSSAVFLKWKAPEL- 887
            |.....||.||..:.......:|..|...:..:.||:|..||....||..||:...:.|:..::
  Fly  1116 IPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180

  Fly   888 -KDRHGVLLNYHV-----IVRGIDTAHNFSRILTNVTIDAASPTLVLANLTEGVMYTVGVAAGNN 946
             ::..|.|:.:.:     ..:..|:.:..||...|..:        :..|.....|.|.|.|.|.
  Fly  1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWAL--------IVGLQPDTYYFVKVMAYNA 1237

  Fly   947 AGVGPYCVPATLRLDPITKRLDPFINQRYPINQDHV 982
            ||.|    |.:.|.:..|.|..|    :.|.:..||
  Fly  1238 AGEG----PESERFEERTYRKAP----QKPPSSVHV 1265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
robo2	NP_001259868.1	Ig1_Robo	90..185	CDD:143317	35/110 (32%)
		I-set	91..184	CDD:254352	35/109 (32%)
		I-set	190..279	CDD:254352	18/95 (19%)
		Ig2_Robo	193..279	CDD:143201	16/92 (17%)
		I-set	283..370	CDD:254352	23/99 (23%)
		Ig	300..370	CDD:299845	18/72 (25%)
		Ig	388..>457	CDD:299845	14/75 (19%)
		I-set	479..561	CDD:254352	29/86 (34%)
		Ig	496..561	CDD:143165	25/66 (38%)
		FN3	588..681	CDD:238020	20/109 (18%)
		FN3	<817..856	CDD:238020	8/53 (15%)
		fn3	864..952	CDD:278470	22/95 (23%)
Cont	NP_649461.2	CLECT	139..>223	CDD:214480
		Ig	361..460	CDD:299845	33/105 (31%)
		I-set	362..462	CDD:254352	34/107 (32%)
		Ig	466..559	CDD:299845	19/100 (19%)
		IG_like	584..657	CDD:214653	20/77 (26%)
		IGc2	586..645	CDD:197706	19/63 (30%)
		Ig	667..751	CDD:299845	17/96 (18%)
		IG_like	676..751	CDD:214653	16/87 (18%)
		IG_like	765..844	CDD:214653	30/90 (33%)
		Ig	773..844	CDD:299845	28/82 (34%)
		I-set	851..940	CDD:254352	20/109 (18%)
		Ig	866..944	CDD:299845	15/85 (18%)
		FN3	944..1043	CDD:238020	18/117 (15%)
		FN3	1053..1146	CDD:238020	18/100 (18%)
		fn3	1156..1244	CDD:278470	23/100 (23%)
		fn3	1259..1346	CDD:278470	3/8 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C107075119
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
	1	0.930