Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_649461.2 | Gene: | Cont / 40553 | FlyBaseID: | FBgn0037240 | Length: | 1390 | Species: | Drosophila melanogaster |
Alignment Length: | 1007 | Identity: | 229/1007 - (22%) |
---|---|---|---|
Similarity: | 369/1007 - (36%) | Gaps: | 218/1007 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 PRIIEHPMDTT--VPKN---DPFTFNCQAEGNPTPTIQWFKDGRELKTD----------TGSHRI 140
Fly 141 MLPAGGLFFLKVIHSRRES-DAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGE 204
Fly 205 VALME------CGAPRGSPEPQISWRKNGQTLNLVGNKRIRIVDGGNLAIQEARQSDDGRYQCVV 263
Fly 264 KNVVGTRESATAFLKVHVRP--------FLIRGPQ--NQTAVVGSSVVFQCRIGGDPLPDVLWRR 318
Fly 319 TASGGNMPLRR--VHVLEDRSLKLDDVTLEDMGEYTCEADNAVGGITATGILTVHAPPKFVIRPK 381
Fly 382 NQLVEIGDEVLFECQANGHPRPTLYWSVEGNSSLLLPGYRDG-RMEVTLTPEGR-----SVLSIA 440
Fly 441 RFAREDSGKVVTCNALNAVG---SVSSRTVVSVDTQFELPPPIIEQGPV---NQTLPVKSIVVLP 499
Fly 500 CRTLGTPVPQVSWYLDGIPIDVQEHERRNLSDAGALTISDLQRHEDEGLYTCVASNRNG-KSSWS 563
Fly 564 GYLRLDTPTNPNIKFFRAPELSTYPGPPGKPQMVEKGENSVTLSWTRSNKVGGSSL-VGYVIEMF 627
Fly 628 G---KNETDG-------WVAVGTRVQNTTFTQTGLLPGVNYFFLIRA-----ENSHGLSLPSPMS 677
Fly 678 EPITVGTRYFNSGLDLSEARASL------LSGDVVELSNASVVDSTSMKLTWQIINGKYVEGFYV 736
Fly 737 YARQLPNPIVNNPAPVTSNTNPLLGSTSTSA------SASASASALIST---KPNIAAAGKRDGE 792
Fly 793 TNQSGGGAP--------TPL--------NTKYRMLTILNGG--------------GASSCTITGL 827
Fly 828 VQYTLYEFFIVPFYKSVEGKPSNSRIARTLEDVPSEAPYGMEALLLNSSAVFLKWKAPEL--KDR 890
Fly 891 HGVLLNYHV-----IVRGIDTAHNFSRILTNVTIDAASPTLVLANLTEGVMYTVGVAAGNNAGVG 950
Fly 951 PYCVPATLRLDPITKRLDPFINQRYPINQDHV 982 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 35/109 (32%) |
I-set | 91..184 | CDD:254352 | 35/108 (32%) | ||
I-set | 190..279 | CDD:254352 | 18/94 (19%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 16/91 (18%) | ||
I-set | 283..370 | CDD:254352 | 23/98 (23%) | ||
Ig | 300..370 | CDD:299845 | 18/71 (25%) | ||
Ig | 388..>457 | CDD:299845 | 14/74 (19%) | ||
I-set | 479..561 | CDD:254352 | 29/85 (34%) | ||
Ig | 496..561 | CDD:143165 | 25/65 (38%) | ||
FN3 | 588..681 | CDD:238020 | 20/108 (19%) | ||
FN3 | <817..856 | CDD:238020 | 8/52 (15%) | ||
fn3 | 864..952 | CDD:278470 | 22/94 (23%) | ||
Cont | NP_649461.2 | CLECT | 139..>223 | CDD:214480 | |
Ig | 361..460 | CDD:299845 | 33/104 (32%) | ||
I-set | 362..462 | CDD:254352 | 34/106 (32%) | ||
Ig | 466..559 | CDD:299845 | 19/99 (19%) | ||
IG_like | 584..657 | CDD:214653 | 20/76 (26%) | ||
IGc2 | 586..645 | CDD:197706 | 18/62 (29%) | ||
Ig | 667..751 | CDD:299845 | 17/95 (18%) | ||
IG_like | 676..751 | CDD:214653 | 16/86 (19%) | ||
IG_like | 765..844 | CDD:214653 | 30/89 (34%) | ||
Ig | 773..844 | CDD:299845 | 28/81 (35%) | ||
I-set | 851..940 | CDD:254352 | 19/108 (18%) | ||
Ig | 866..944 | CDD:299845 | 15/84 (18%) | ||
FN3 | 944..1043 | CDD:238020 | 18/112 (16%) | ||
FN3 | 1053..1146 | CDD:238020 | 18/99 (18%) | ||
fn3 | 1156..1244 | CDD:278470 | 23/99 (23%) | ||
fn3 | 1259..1346 | CDD:278470 | 3/7 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45452261 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |