| Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_649461.2 | Gene: | Cont / 40553 | FlyBaseID: | FBgn0037240 | Length: | 1390 | Species: | Drosophila melanogaster |
| Alignment Length: | 1007 | Identity: | 229/1007 - (22%) |
|---|---|---|---|
| Similarity: | 369/1007 - (36%) | Gaps: | 218/1007 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 91 PRIIEHPMDTT--VPKN---DPFTFNCQAEGNPTPTIQWFKDGRELKTD----------TGSHRI 140
Fly 141 MLPAGGLFFLKVIHSRRES-DAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGE 204
Fly 205 VALME------CGAPRGSPEPQISWRKNGQTLNLVGNKRIRIVDGGNLAIQEARQSDDGRYQCVV 263
Fly 264 KNVVGTRESATAFLKVHVRP--------FLIRGPQ--NQTAVVGSSVVFQCRIGGDPLPDVLWRR 318
Fly 319 TASGGNMPLRR--VHVLEDRSLKLDDVTLEDMGEYTCEADNAVGGITATGILTVHAPPKFVIRPK 381
Fly 382 NQLVEIGDEVLFECQANGHPRPTLYWSVEGNSSLLLPGYRDG-RMEVTLTPEGR-----SVLSIA 440
Fly 441 RFAREDSGKVVTCNALNAVG---SVSSRTVVSVDTQFELPPPIIEQGPV---NQTLPVKSIVVLP 499
Fly 500 CRTLGTPVPQVSWYLDGIPIDVQEHERRNLSDAGALTISDLQRHEDEGLYTCVASNRNG-KSSWS 563
Fly 564 GYLRLDTPTNPNIKFFRAPELSTYPGPPGKPQMVEKGENSVTLSWTRSNKVGGSSL-VGYVIEMF 627
Fly 628 G---KNETDG-------WVAVGTRVQNTTFTQTGLLPGVNYFFLIRA-----ENSHGLSLPSPMS 677
Fly 678 EPITVGTRYFNSGLDLSEARASL------LSGDVVELSNASVVDSTSMKLTWQIINGKYVEGFYV 736
Fly 737 YARQLPNPIVNNPAPVTSNTNPLLGSTSTSA------SASASASALIST---KPNIAAAGKRDGE 792
Fly 793 TNQSGGGAP--------TPL--------NTKYRMLTILNGG--------------GASSCTITGL 827
Fly 828 VQYTLYEFFIVPFYKSVEGKPSNSRIARTLEDVPSEAPYGMEALLLNSSAVFLKWKAPEL--KDR 890
Fly 891 HGVLLNYHV-----IVRGIDTAHNFSRILTNVTIDAASPTLVLANLTEGVMYTVGVAAGNNAGVG 950
Fly 951 PYCVPATLRLDPITKRLDPFINQRYPINQDHV 982 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| robo2 | NP_001259868.1 | IgC_1_Robo | 91..185 | CDD:409490 | 35/109 (32%) |
| Ig strand A | 91..95 | CDD:409490 | 1/3 (33%) | ||
| Ig strand A' | 98..103 | CDD:409490 | 3/6 (50%) | ||
| Ig strand B | 107..115 | CDD:409490 | 2/7 (29%) | ||
| Ig strand C | 121..126 | CDD:409490 | 1/4 (25%) | ||
| Ig strand C' | 129..131 | CDD:409490 | 1/1 (100%) | ||
| Ig strand D | 139..142 | CDD:409490 | 1/2 (50%) | ||
| Ig strand E | 145..151 | CDD:409490 | 2/5 (40%) | ||
| Ig strand F | 162..170 | CDD:409490 | 4/7 (57%) | ||
| Ig strand G | 173..185 | CDD:409490 | 5/11 (45%) | ||
| IgI_2_Robo | 192..279 | CDD:409389 | 16/92 (17%) | ||
| Ig strand A | 192..195 | CDD:409389 | 1/2 (50%) | ||
| Ig strand A' | 197..201 | CDD:409389 | 0/3 (0%) | ||
| Ig strand B | 205..212 | CDD:409389 | 2/12 (17%) | ||
| Ig strand C | 220..225 | CDD:409389 | 1/4 (25%) | ||
| Ig strand C' | 227..230 | CDD:409389 | 0/2 (0%) | ||
| Ig strand D | 237..241 | CDD:409389 | 1/3 (33%) | ||
| Ig strand E | 244..250 | CDD:409389 | 2/5 (40%) | ||
| Ig strand F | 257..265 | CDD:409389 | 3/7 (43%) | ||
| Ig strand G | 268..279 | CDD:409389 | 1/10 (10%) | ||
| Ig | 286..370 | CDD:472250 | 21/87 (24%) | ||
| Ig strand B | 300..304 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 313..317 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 336..340 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 350..355 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 363..366 | CDD:409353 | 0/2 (0%) | ||
| Ig_3 | 373..457 | CDD:464046 | 18/89 (20%) | ||
| Ig | 480..566 | CDD:472250 | 30/89 (34%) | ||
| Ig strand B | 496..500 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 509..513 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 533..537 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 548..553 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 561..564 | CDD:409353 | 1/2 (50%) | ||
| COG3979 | 586..>800 | CDD:443178 | 46/244 (19%) | ||
| FN3 | 588..681 | CDD:238020 | 20/108 (19%) | ||
| fn3 | 864..952 | CDD:394996 | 22/94 (23%) | ||
| Cont | NP_649461.2 | CLECT | 139..>223 | CDD:214480 | |
| Ig | 361..466 | CDD:472250 | 35/110 (32%) | ||
| Ig strand B | 384..388 | CDD:409356 | 1/3 (33%) | ||
| Ig strand C | 397..409 | CDD:409356 | 4/14 (29%) | ||
| Ig strand E | 428..432 | CDD:409356 | 2/7 (29%) | ||
| Ig strand F | 443..448 | CDD:409356 | 2/4 (50%) | ||
| Ig strand G | 457..460 | CDD:409356 | 1/2 (50%) | ||
| Ig | 474..559 | CDD:472250 | 15/84 (18%) | ||
| Ig strand B | 485..489 | CDD:409392 | 0/3 (0%) | ||
| Ig strand C | 499..503 | CDD:409392 | 0/3 (0%) | ||
| Ig strand E | 523..527 | CDD:409392 | 2/3 (67%) | ||
| Ig strand F | 537..542 | CDD:409392 | 2/4 (50%) | ||
| Ig strand G | 553..556 | CDD:409392 | 0/2 (0%) | ||
| Ig_3 | 584..644 | CDD:464046 | 19/63 (30%) | ||
| Ig_3 | 660..738 | CDD:464046 | 18/89 (20%) | ||
| Ig | 756..844 | CDD:472250 | 32/98 (33%) | ||
| Ig strand B | 775..779 | CDD:409358 | 1/11 (9%) | ||
| Ig strand C | 788..792 | CDD:409358 | 0/3 (0%) | ||
| Ig strand E | 810..814 | CDD:409358 | 2/3 (67%) | ||
| Ig strand F | 824..829 | CDD:409358 | 3/4 (75%) | ||
| Ig strand G | 837..840 | CDD:409358 | 1/2 (50%) | ||
| Ig | <868..944 | CDD:472250 | 15/82 (18%) | ||
| Ig strand C | 881..885 | CDD:409359 | 2/3 (67%) | ||
| Ig strand E | 906..910 | CDD:409359 | 0/5 (0%) | ||
| Ig strand F | 920..925 | CDD:409359 | 1/4 (25%) | ||
| Ig strand G | 933..936 | CDD:409359 | 0/2 (0%) | ||
| FN3 | 944..1043 | CDD:238020 | 18/112 (16%) | ||
| FN3 | 1053..1146 | CDD:238020 | 18/99 (18%) | ||
| fn3 | 1156..1244 | CDD:394996 | 23/99 (23%) | ||
| fn3 | 1259..1346 | CDD:394996 | 3/7 (43%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||