DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and yjfP

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_418611.1 Gene:yjfP / 948707 ECOCYCID:G7853 Length:249 Species:Escherichia coli


Alignment Length:273 Identity:54/273 - (19%)
Similarity:88/273 - (32%) Gaps:86/273 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 SRIYIPIPTMHNLPHITVSIKTPDDVTLHAFWVTQPEERSKSSPTLLYF---------------- 114
            ||....||.:|..|........|..:..|.|        :.||....||                
E. coli     6 SRELADIPVLHAYPVGQKDTPLPCVIFYHGF--------TSSSLVYSYFAVALAQAGLRVIMPDA 62

  Fly   115 --HGN--AGNMGHRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAAIDYLHTRHD 175
              ||:  :|:...|:...|        .:|:...:.:........|...:.|.|.|:.       
E. coli    63 PDHGSRFSGDAARRLNQFW--------QILLQSMQEFTTLRAAIAEENWLLDDRLAVG------- 112

  Fly   176 LDHSQLILFGRSLGGAVVVDVAA--------DTVYGQKLMCAIVENTFSS-IPEMAVE------L 225
                     |.|:|....:.:.|        .::.|.....::..:.|.. |||.|.:      :
E. coli   113 ---------GASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETAAQQNEFNNI 168

  Fly   226 VHPAVKYIPNLLFKNKYHSMSKIGKCSVPFLFISGLADNLVPP----RMMRALYTKCGSEIKRLL 286
            |.|..::...    |....:|     ..|.|...||.|::||.    |:.:|| ::.|.:  :||
E. coli   169 VAPLAEWEAT----NHLEQLS-----DRPLLLWHGLDDDVVPADESLRLQQAL-SETGRD--KLL 221

  Fly   287 EF---PGGSHNDT 296
            ..   ||..|..|
E. coli   222 TCSWQPGVRHRIT 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 51/266 (19%)
yjfPNP_418611.1 PRK10566 1..249 CDD:182555 54/273 (20%)

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