DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and AT3G23540

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_188996.2 Gene:AT3G23540 / 821933 AraportID:AT3G23540 Length:566 Species:Arabidopsis thaliana


Alignment Length:259 Identity:65/259 - (25%)
Similarity:112/259 - (43%) Gaps:51/259 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HAFWVTQPEERSKSSPTLLYFHGNAGNMGHRMQ--------NVWGIYHHLHCNVLMVEYRGYGLS 150
            |...|.:||  .|..|.::|.|||:|......:        |:         .|..:::.|.|||
plant    53 HYMPVERPE--GKPLPCVIYCHGNSGCRADGSEAAIVLLPSNI---------TVFTLDFSGSGLS 106

  Fly   151 TGVPTERGL--VTDARAAIDYLHTRHDLDHSQLILFGRSLGG--AVVVDVAADTVYGQKLMCAIV 211
            .|.....|.  ..|.:|.:::|  |.|.:.|.:.|:|||:|.  :::..|...::.|.     |:
plant   107 GGEHVTLGWNEKDDLKAVVEFL--RQDGNISLIGLWGRSMGAVTSLMYGVEDPSIAGM-----IL 164

  Fly   212 ENTFSSIPEMAVELVHP------------AVKYIPNLLFKN-KYHSMS----KIGKCS-VPFLFI 258
            ::.||.:.::.:|||..            |::::...:.|. |:..|.    |:.|.| ||.||.
plant   165 DSPFSDLVDLMMELVDTYKFRLPKFTVKFAIQFMRRAIQKKAKFDIMELNTIKVAKASFVPVLFG 229

  Fly   259 SGLADNLVPPRMMRALYTKCGSEIKRLLEFPGGSHNDTWIVDGYYQAIGGFLAELQQQPLLKAP 322
            ..|.|:.:.|.....:|.....: |.:::|| |.||.. ....|:.:|..|...:.|.|.:..|
plant   230 HALDDDFIRPHHSDRIYEAYVGD-KNIIKFP-GDHNSP-RPPFYFDSINIFFHNVLQPPEVVGP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 62/247 (25%)
AT3G23540NP_188996.2 FrsA 35..282 CDD:440691 62/249 (25%)

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