DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and Acot4

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001102910.1 Gene:Acot4 / 681337 RGDID:1596753 Length:421 Species:Rattus norvegicus


Alignment Length:236 Identity:52/236 - (22%)
Similarity:88/236 - (37%) Gaps:69/236 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 MVEYR-----GYGLST---------GVPTERGLVTDARAAIDYLHTR--HDLDHSQ-----LILF 184
            ::|||     |:|.:|         .:|.|..::     .:||....  :.|.|.:     :.|.
  Rat   170 LLEYRASLLAGHGFATLALAFYGFEDLPKEFNVI-----EVDYFEEAVCYMLQHPKVKGPDIGLL 229

  Fly   185 GRSLGGAVVVDVAADTVYGQKLMCAIVENTFSS----------IPEMAVELVHPAVKY--IPNLL 237
            |.|||..|.: :.|..:.......:|..:.||.          ||.:..:|....|.:  |.:::
  Rat   230 GLSLGADVCL-IMASFLKNVSATVSINGSAFSGNRYIHYKQTMIPPLGHDLRRTKVAFSGILDIV 293

  Fly   238 -FKN------KYHSMSKIGKCSVPFLFISGLADNLVPPRMMRALYTKC--------GSEIKRLLE 287
             .:|      :..||..|.|...|.||::|..|:.    ....|||:.        |.|..:::.
  Rat   294 DIRNDAVGGCENPSMIPIEKAKGPILFVAGQDDHC----WRSELYTQIASERLQAHGKERPQIIS 354

  Fly   288 FPGGSHNDTWIVDGYYQAIGGFLAELQQQPLLKAPEKSNVW 328
            :||..|   :|...|:        .:....|.|...|:.||
  Rat   355 YPGTGH---YIEPPYF--------PMCPASLHKIVNKAVVW 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 47/218 (22%)
Acot4NP_001102910.1 Bile_Hydr_Trans 16..141 CDD:461422
Axe1 139..>188 CDD:442681 6/17 (35%)
BAAT_C 203..412 CDD:430252 44/203 (22%)
Blue background indicates that the domain is not in the aligned region.

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