DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and si:ch211-117n7.6

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_021328354.1 Gene:si:ch211-117n7.6 / 555902 ZFINID:ZDB-GENE-060503-474 Length:344 Species:Danio rerio


Alignment Length:284 Identity:78/284 - (27%)
Similarity:119/284 - (41%) Gaps:57/284 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IPTMHNLPHITVSIKTPDDVTLH---------------AFWVTQPEERSK--------------- 106
            |||:.::....|.:..|.||.|:               ..|.|.||.|.|               
Zfish    50 IPTLQHVLSDFVDLSHPLDVGLNHTINVYLKPEEGVRVGVWHTVPEHRWKEAQGKNAEWYEKALG 114

  Fly   107 -SSPTLLYFHGNAGNMG--HRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAAID 168
             .||..:|.|||.||..  ||: .|..:...|..:||:::|||:|.|||.|||.||.|||....:
Zfish   115 DGSPIFIYLHGNGGNRSALHRI-GVANVLSALGYHVLVMDYRGFGDSTGEPTEPGLTTDALYLYN 178

  Fly   169 YLHTRHDLDHSQLILFGRSLGGAVVVDVAADTV-YGQKLMCAIVENTFSSIPEMAVELVHP---- 228
            ::..|.  .:|.:.::|.|:|..|..:||...: .|:|....|:|....|....|.:..||    
Zfish   179 WIKKRS--GNSLVCVWGHSIGSGVTTNVAVKLLEEGKKFDGIILEGAMLSGRAAAKQYGHPFSWF 241

  Fly   229 --AVKYIPNLLF----KNK--YHSMSKIGKCSVPFLFISGLADNLVPPRMMRALY-----TKCGS 280
              ...||...||    .||  :.....:.|...|.|.:....|::.|..:.:.:|     .:...
Zfish   242 YWKFPYIQFFLFNPLKNNKIVFPLDENLEKIRTPILILHSKDDHVSPFSVAQEIYRIAKKAQNSD 306

  Fly   281 EIKRLLEFPGGSHNDTWIVDGYYQ 304
            |..:|:.| .|.|.  ::.:|.|:
Zfish   307 ERVKLVLF-DGKHG--YLHNGLYR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 77/283 (27%)
si:ch211-117n7.6XP_021328354.1 FrsA 106..340 CDD:440691 64/228 (28%)

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