DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bem46 and abhd17c

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001004867.1 Gene:abhd17c / 448170 XenbaseID:XB-GENE-6040893 Length:310 Species:Xenopus tropicalis


Alignment Length:218 Identity:59/218 - (27%)
Similarity:101/218 - (46%) Gaps:32/218 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 KSSP----TLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAA 166
            :.||    |:|:.||||.::|.......|:...::||:...:|.|||:|:|.|:|:.|..|..||
 Frog   107 RCSPGSRYTVLFSHGNAVDLGQMCSFYIGLGTRINCNIFSYDYSGYGVSSGKPSEKNLYADIEAA 171

  Fly   167 IDYLHTRHDLDHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAVK 231
            ...|.||:.:....:||:|:|:|....||:|:      :..||.|             ::|..:.
 Frog   172 WHALRTRYGVTPENIILYGQSIGTVPTVDLAS------RYECAAV-------------ILHSPLM 217

  Fly   232 YIPNLLFK--------NKYHSMSKIGKCSVPFLFISGLADNLVPPRMMRALYTKCGSEIKRLLEF 288
            ....:.|.        :.:.|:.||.|.:.|.|.|.|..|.::......|:|.:|...::.|. .
 Frog   218 SGLRVAFPDTRKTYCFDAFPSIDKISKVTSPVLIIHGTEDEVIDFSHGLAMYERCPRAVEPLW-V 281

  Fly   289 PGGSHNDTWIVDGYYQAIGGFLA 311
            .|..|||..:...|.:.:..|::
 Frog   282 EGAGHNDIELYAQYLERLKQFIS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 59/218 (27%)
abhd17cNP_001004867.1 FrsA 115..307 CDD:440691 57/210 (27%)

Return to query results.
Submit another query.