DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and CG1309

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_647880.1 Gene:CG1309 / 38519 FlyBaseID:FBgn0035519 Length:524 Species:Drosophila melanogaster


Alignment Length:191 Identity:40/191 - (20%)
Similarity:74/191 - (38%) Gaps:13/191 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ITVSIKTPDDVTLHAFWV-TQPEERSKSSPTLLYFHGNAG--NMGHRMQNVWGIYHHLHCNVLMV 142
            |...:||.|...:...:: .:|.........::...||||  .:|.....|     .|..:||..
  Fly   215 IRYKVKTIDSNEIDTLFIDNRPNNVGNGKTLVICSEGNAGFYEVGIMATPV-----ALKYSVLGW 274

  Fly   143 EYRGYGLSTGVPTERGLVTDARAAIDYLHTRHDLDHSQLILFGRSLGGAVVVDVAADTVYGQKLM 207
            .:.|:..|||.|..........|.:.:...........:||:|.|:||...:..|  :|| ..:.
  Fly   275 NHPGFAGSTGTPHPHQDKNAIDAVVQFAINNLRFPVEDIILYGWSIGGFSTLYAA--SVY-PDVK 336

  Fly   208 CAIVENTFSSIPEMAVELVHPAVKYIPNLLFKN--KYHSMSKIGKCSVPFLFISGLADNLV 266
            ..:::.||..:..:||..:..|:..|..:..:|  ..::.....:.:.|..||....|.::
  Fly   337 GVVLDATFDDVLYLAVPRMPAALAGIVKVAIRNYCNLNNAELANEFNGPISFIRRTEDEII 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 40/191 (21%)
CG1309NP_647880.1 FrsA 236..>347 CDD:440691 27/118 (23%)

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