DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and Abhd17c

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001094206.1 Gene:Abhd17c / 361601 RGDID:1308210 Length:320 Species:Rattus norvegicus


Alignment Length:210 Identity:58/210 - (27%)
Similarity:98/210 - (46%) Gaps:28/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 TLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAAIDYLHTRH 174
            |||:.||||.::|.......|:...::||:...:|.|||:|:|.|:|:.|..|..||...|.||:
  Rat   125 TLLFSHGNAVDLGQMCSFYIGLGSRINCNIFSYDYSGYGVSSGKPSEKNLYADIDAAWQALRTRY 189

  Fly   175 DLDHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAVKYIPNLLFK 239
            .:....:||:|:|:|....||:|:      :..||.|             ::|..:.....:.|.
  Rat   190 GVSPENIILYGQSIGTVPTVDLAS------RYECAAV-------------ILHSPLMSGLRVAFP 235

  Fly   240 --------NKYHSMSKIGKCSVPFLFISGLADNLVPPRMMRALYTKCGSEIKRLLEFPGGSHNDT 296
                    :.:.|:.||.|.:.|.|.|.|..|.::......|:|.:|...::.|. ..|..|||.
  Rat   236 DTRKTYCFDAFPSIDKISKVTSPVLVIHGTEDEVIDFSHGLAMYERCPRAVEPLW-VEGAGHNDI 299

  Fly   297 WIVDGYYQAIGGFLA 311
            .:...|.:.:..|::
  Rat   300 ELYAQYLERLKQFIS 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 58/210 (28%)
Abhd17cNP_001094206.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..75
FrsA 99..317 CDD:440691 58/210 (28%)
Blue background indicates that the domain is not in the aligned region.

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