DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bem46 and Y41E3.18

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001023462.2 Gene:Y41E3.18 / 3565105 WormBaseID:WBGene00044003 Length:481 Species:Caenorhabditis elegans


Alignment Length:239 Identity:56/239 - (23%)
Similarity:101/239 - (42%) Gaps:50/239 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 DDVTLHAFWVTQPEERSK-----------SSP--TLLYFHGNAGNMGHRM---QNVWGIYHHLHC 137
            |||.....:|.:.:.::|           .:|  ||||.|.|..::...:   .::..|.....|
 Worm   239 DDVKYVRGFVLKTKNKNKIGCVYVGCPDGFAPRFTLLYSHPNGSDLSDHLIGIPSLIDIARFYRC 303

  Fly   138 NVLMVEYRGYGLSTGVPTERGLVTDARAAIDYLHTRHDLDHSQLILFGRSLGGAVVVDVAADTVY 202
            .|...:|.|||:|.|:.:|..|.:|.:|..:::.....:|..:::|.|.|:|.|..:::.... .
 Worm   304 EVYSYDYTGYGISGGIASESNLYSDIQAIYEHITLEKRVDPKKIVLLGYSIGSAATIELLRHE-Q 367

  Fly   203 GQKLMCAIVENTFSSIPEMAVELVHPAVKYIPNLLFKNK-----------YHSMSKIGKCSVPFL 256
            .||....|::...:||           ::.|..::.:.|           :.::.||.:..:|.|
 Worm   368 DQKPAGVILQAPPTSI-----------LRVIGGMMGRTKHLEKKTCCIDRFVTIDKIHEIQIPIL 421

  Fly   257 FISGLADNLVPPR-----MMRALYTKCGSEIKRLLEFPGGSHND 295
            .|.|.||..||..     ..||: ||...|     ..||.:|::
 Worm   422 VIHGKADKTVPVEHGKLICQRAI-TKVAPE-----WVPGAAHDN 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 56/239 (23%)
Y41E3.18NP_001023462.2 FrsA 247..475 CDD:440691 53/231 (23%)

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