DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bem46 and Abhd17b

DIOPT Version :10

Sequence 1:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001014050.1 Gene:Abhd17b / 309399 RGDID:1305246 Length:288 Species:Rattus norvegicus


Alignment Length:217 Identity:61/217 - (28%)
Similarity:100/217 - (46%) Gaps:28/217 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 KSSP----TLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAA 166
            :.||    |||:.||||.::|.......|:...::||:...:|.|||.|:|.|||:.|..|..||
  Rat    85 RCSPNAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADVEAA 149

  Fly   167 IDYLHTRHDLDHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAVK 231
            ...|.||:.:....:|::|:|:|....||:||    ..:....|:.:..:|    .:.:..|..|
  Rat   150 WLALRTRYGIRPENVIIYGQSIGTVPSVDLAA----RYESAAVILHSPLTS----GMRVAFPDTK 206

  Fly   232 ------YIPNLLFKNKYHSMSKIGKCSVPFLFISGLADNLVPPRMMRALYTKCGSEIKRLLEFPG 290
                  ..||:         .||.|.:.|.|.|.|..|.::......||:.:|...::.|. ..|
  Rat   207 KTYCFDAFPNI---------DKISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLW-VEG 261

  Fly   291 GSHNDTWIVDGYYQAIGGFLAE 312
            ..|||..:...|.:.:..|:::
  Rat   262 AGHNDVELYGQYLERLKQFVSQ 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bem46NP_477372.1 FrsA 73..312 CDD:440691 61/215 (28%)
Abhd17bNP_001014050.1 FrsA 58..285 CDD:440691 61/217 (28%)

Return to query results.
Submit another query.